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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   DNMT2   tRNA (cytosine(38)-C(5))-methyltransferase 
 sly-r.6   DNMT2   tRNA (cytosine(38)-C(5))-methyltransferase 
 sot-r.1   102596409   tRNA (cytosine(38)-C(5))-methyltransferase 
 nta-r.1   107814185   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 nta-r.1   107829352   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 ath-u.5   DNMT2   DNA methyltransferase-2 
 gma-u.5   100792567   tRNA (cytosine-5-)-methyltransferase-like 
 bra-r.6   103874407   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 vvi-u.5   109121395   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 ppo-u.5   7495763   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 mtr-u.5   11433867   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 ghi-r.1   107907768   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 bna-r.1   106348535   tRNA (cytosine(38)-C(5))-methyltransferase 2-like 
 bna-r.1   106407360   tRNA (cytosine(38)-C(5))-methyltransferase 2-like 
 cit-r.1   102609884   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 osa-u.5   9268926   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 zma-u.5   542067   DNA methyl transferase 4 
 tae-r.2   123061457   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 tae-r.2   123070101   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 tae-r.2   100859954   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 hvu-r.1   123443860   tRNA (cytosine(38)-C(5))-methyltransferase 2 
 sbi-r.1   8054375   tRNA (cytosine(38)-C(5))-methyltransferase 
 bdi-r.1   100822436   tRNA (cytosine(38)-C(5))-methyltransferase 
 cre-r.1   CHLRE_12g484600v5   uncharacterized protein 

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Top 50 coexpressed genes to DNMT2 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DNMT2 (sly-u.5 coexpression data)

CoexMap"101263628"


slyDNMT2 | Entrez gene ID : 101263628      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 1 1 1 1 2 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (286 genes)  IEA  
Protein NP_001353690.1 [sequence] [blastp]
XP_025888103.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001353690.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_025888103.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for NP_001353690.1)
other 7,  mito 5  (predict for XP_025888103.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
DNMT2
sly-r.6
for
DNMT2
sot-r.1
for
102596409
nta-r.1
for
107814185
nta-r.1
for
107829352
ath-u.5
for
DNMT2
gma-u.5
for
100792567
bra-r.6
for
103874407
vvi-u.5
for
109121395
ppo-u.5
for
7495763
mtr-u.5
for
11433867
ghi-r.1
for
107907768
bna-r.1
for
106348535
bna-r.1
for
106407360
cit-r.1
for
102609884
osa-u.5
for
9268926
zma-u.5
for
542067
tae-r.2
for
123061457
tae-r.2
for
123070101
tae-r.2
for
100859954
hvu-r.1
for
123443860
sbi-r.1
for
8054375
bdi-r.1
for
100822436
cre-r.1
for
CHLRE_12g484600v5


Ortholog ID: 10959
Species sly sot nta nta ath gma bra vvi ppo mtr ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol DNMT2 LOC102596409 LOC107814185 LOC107829352 DNMT2 LOC100792567 LOC103874407 LOC109121395 LOC7495763 LOC11433867 LOC107907768 LOC106348535 LOC106407360 LOC102609884 LOC9268926 LOC542067 LOC123061457 LOC123070101 LOC100859954 LOC123443860 LOC8054375 LOC100822436 CHLRE_12g484600v5
Function* tRNA (cytosine(38)-C(5))-methyltransferase tRNA (cytosine(38)-C(5))-methyltransferase tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 DNA methyltransferase-2 tRNA (cytosine-5-)-methyltransferase-like tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2-like tRNA (cytosine(38)-C(5))-methyltransferase 2-like tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 DNA methyl transferase 4 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase 2 tRNA (cytosine(38)-C(5))-methyltransferase tRNA (cytosine(38)-C(5))-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03013 Nucleocytoplasmic transport 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03013 Nucleocytoplasmic transport 5
sbi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 5
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263628 102596409 107814185 107829352 832623 100792567 103874407 109121395 7495763 11433867 107907768 106348535 106407360 102609884 9268926 542067 123061457 123070101 100859954 123443860 8054375 100822436 5728714
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