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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264117   protein OSB1, mitochondrial-like 
 sly-r.6   101264117   protein OSB1, mitochondrial-like 
 sly-u.5   101244412   single-stranded DNA binding protein-like protein 
 ath-u.5   OSB1   Primosome PriB/single-strand DNA-binding protein 
 gma-u.5   100818465   protein OSB1, mitochondrial 
 gma-u.5   100816851   protein OSB1, mitochondrial 
 gma-u.5   100796160   protein OSB2, chloroplastic 
 vvi-u.5   100242562   protein OSB2, chloroplastic 
 ppo-u.5   18104947   protein OSB1, mitochondrial 
 ppo-u.5   7454322   protein OSB2, chloroplastic 
 ppo-u.5   7480001   protein OSB2, chloroplastic 
 mtr-u.5   11423120   protein OSB2, chloroplastic 
 mtr-u.5   11412580   protein OSB1, mitochondrial 
 osa-u.5   9267160   protein OSB1, mitochondrial 
 osa-u.5   4333513   protein OSB2, chloroplastic 
 zma-u.5   100283943   single-strand binding protein 
 zma-u.5   100276246   uncharacterized LOC100276246 
 zma-u.5   100282454   uncharacterized LOC100282454 

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Top 50 coexpressed genes to 101264117 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264117 (sly-u.5 coexpression data)

CoexMap"101264117"


slyLOC101264117 | Entrez gene ID : 101264117      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 3 1 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051096 [list] [network] positive regulation of helicase activity  (5 genes)  IEA  
GO:0006264 [list] [network] mitochondrial DNA replication  (6 genes)  IEA  
GO CC
GO:0042645 [list] [network] mitochondrial nucleoid  (5 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (57 genes)  IEA  
Protein XP_004238188.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  mito 2,  extr 1,  cyto_nucl 1  (predict for XP_004238188.2)
Subcellular
localization
TargetP
scret 2  (predict for XP_004238188.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264117

.
sly-r.6
for
101264117

.
sly-u.5
for
101244412

.
ath-u.5
for
OSB1

.
gma-u.5
for
100818465

.
gma-u.5
for
100816851

.
gma-u.5
for
100796160

.
vvi-u.5
for
100242562

.
ppo-u.5
for
18104947

.
ppo-u.5
for
7454322

.
ppo-u.5
for
7480001

.
mtr-u.5
for
11423120

.
mtr-u.5
for
11412580

.
osa-u.5
for
9267160

.
osa-u.5
for
4333513

.
zma-u.5
for
100283943

.
zma-u.5
for
100276246

.
zma-u.5
for
100282454

.


Ortholog ID: 3872
Species ath gma gma sly sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol OSB1 LOC100796160 LOC100818465 LOC101264117 LOC101244412 LOC4333513 LOC9267160 LOC100276246 LOC100283943 LOC103833065 LOC100242562 LOC7454322 LOC18104947 LOC11412580 LOC11423120 LOC123113243 LOC123122750 LOC123452143 LOC123447793 LOC107955470 LOC107941655 LOC125577004 LOC106432624 CHLRE_12g483700v5 LOC8062244 LOC8062513 LOC102578435 LOC102583761 LOC102627636 LOC102607845 LOC100840472 LOC100829773 LOC107824950 LOC107779956
Function* Primosome PriB/single-strand DNA-binding protein protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB1, mitochondrial-like single-stranded DNA binding protein-like protein protein OSB2, chloroplastic protein OSB1, mitochondrial uncharacterized LOC100276246 single-strand binding protein protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB2, chloroplastic-like protein OSB1, mitochondrial-like protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB1, mitochondrial-like protein OSB1, mitochondrial uncharacterized protein protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB2, chloroplastic-like protein OSB1, mitochondrial-like protein OSB1, mitochondrial protein OSB2, chloroplastic-like protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03018 RNA degradation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre00240 Pyrimidine metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841183 100796160 100818465 101264117 101244412 4333513 9267160 100276246 100283943 103833065 100242562 7454322 18104947 11412580 11423120 123113243 123122750 123452143 123447793 107955470 107941655 125577004 106432624 5728724 8062244 8062513 102578435 102583761 102627636 102607845 100840472 100829773 107824950 107779956
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