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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265077   probable pectin methylesterase CGR3 
 sly-r.6   101265077   probable pectin methylesterase CGR3 
 sly-m.5   101265077   probable pectin methylesterase CGR3 
 sly-u.5   101249725   probable pectin methylesterase CGR3 
 sly-u.5   101245514   probable pectin methylesterase CGR2 
 sly-u.5   101256717   probable pectin methylesterase CGR3 
 sot-r.1   102578463   uncharacterized protein At3g49720-like 
 sot-r.1   102583825   uncharacterized protein At3g49720-like 
 sot-r.1   102588140   uncharacterized protein At3g49720-like 
 nta-r.1   107768381   putative pectin methylesterase CGR3 
 nta-r.1   107804123   putative pectin methylesterase CGR2 
 nta-r.1   107771745   putative pectin methylesterase CGR3 
 ath-u.5   AT3G49720   uncharacterized protein 
 ath-u.5   CGR3   uncharacterized protein 
 gma-u.5   100791487   uncharacterized LOC100791487 
 gma-u.5   100783342   uncharacterized LOC100783342 
 gma-u.5   100800870   uncharacterized LOC100800870 
 bra-r.6   103837596   probable pectin methylesterase CGR3 
 bra-r.6   103873032   probable pectin methylesterase CGR2 
 bra-r.6   103874021   probable pectin methylesterase CGR3 
 vvi-u.5   100255908   probable pectin methylesterase CGR2 
 vvi-u.5   100244559   probable pectin methylesterase CGR2 
 vvi-u.5   100243785   probable pectin methylesterase CGR3 
 ppo-u.5   7470771   probable pectin methylesterase CGR3 
 ppo-u.5   7469664   probable pectin methylesterase CGR2 
 mtr-u.5   11429251   probable pectin methylesterase CGR3 
 mtr-u.5   25482029   probable pectin methylesterase CGR2 
 ghi-r.1   107935263   probable pectin methylesterase CGR2 
 ghi-r.1   107899206   probable pectin methylesterase CGR3 
 ghi-r.1   107905168   probable pectin methylesterase CGR2 
 bna-r.1   106446254   probable pectin methylesterase CGR2 
 bna-r.1   BNAA09G07220D   probable pectin methylesterase CGR3 
 bna-r.1   106346624   probable pectin methylesterase CGR3 
 cit-r.1   102624811   probable pectin methylesterase CGR2 
 cit-r.1   102615263   probable pectin methylesterase CGR2 
 osa-u.5   4325464   probable pectin methylesterase CGR2 
 zma-u.5   100276063   uncharacterized LOC100276063 
 zma-u.5   100272653   uncharacterized LOC100272653 
 tae-r.2   123068534   probable pectin methylesterase CGR2 
 tae-r.2   123060057   probable pectin methylesterase CGR2 
 tae-r.2   123077047   probable pectin methylesterase CGR2 
 hvu-r.1   123442638   probable pectin methylesterase CGR2 
 sbi-r.1   8073315   uncharacterized protein At3g49720 
 bdi-r.1   100827884   uncharacterized protein At3g49720 

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Top 50 coexpressed genes to 101265077 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265077 (sly-u.5 coexpression data)

CoexMap"101265077"


slyLOC101265077 | Entrez gene ID : 101265077      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 6 3 3 2 3 3 3 2 2 3 3 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045488 [list] [network] pectin metabolic process  (28 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (286 genes)  IEA  
Protein XP_004248786.1 [sequence] [blastp]
XP_010327490.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 2,  vacu 1,  mito_plas 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_004248786.1)
chlo 3,  mito 2,  vacu 1,  mito_plas 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_010327490.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_004248786.1)
mito 4,  other 3  (predict for XP_010327490.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265077
sly-r.6
for
101265077
sly-m.5
for
101265077
sly-u.5
for
101249725
sly-u.5
for
101245514
sly-u.5
for
101256717
sot-r.1
for
102578463
sot-r.1
for
102583825
sot-r.1
for
102588140
nta-r.1
for
107768381
nta-r.1
for
107804123
nta-r.1
for
107771745
ath-u.5
for
AT3G49720
ath-u.5
for
CGR3
gma-u.5
for
100791487
gma-u.5
for
100783342
gma-u.5
for
100800870
bra-r.6
for
103837596
bra-r.6
for
103873032
bra-r.6
for
103874021
vvi-u.5
for
100255908
vvi-u.5
for
100244559
vvi-u.5
for
100243785
ppo-u.5
for
7470771
ppo-u.5
for
7469664
mtr-u.5
for
11429251
mtr-u.5
for
25482029
ghi-r.1
for
107935263
ghi-r.1
for
107899206
ghi-r.1
for
107905168
bna-r.1
for
106446254
bna-r.1
for
BNAA09G07220D
bna-r.1
for
106346624
cit-r.1
for
102624811
cit-r.1
for
102615263
osa-u.5
for
4325464
zma-u.5
for
100276063
zma-u.5
for
100272653
tae-r.2
for
123068534
tae-r.2
for
123060057
tae-r.2
for
123077047
hvu-r.1
for
123442638
sbi-r.1
for
8073315
bdi-r.1
for
100827884


Ortholog ID: 1983
Species sly sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa zma zma tae tae tae hvu sbi bdi
Symbol LOC101265077 LOC101245514 LOC101256717 LOC102578463 LOC102583825 LOC102588140 LOC107768381 LOC107771745 LOC107828760 AT3G49720 CGR3 LOC100800870 LOC100805476 LOC100778341 LOC103837596 LOC103873032 LOC103875453 LOC100255908 LOC100244559 LOC100243785 LOC7470771 LOC7469664 LOC25482029 LOC11431552 LOC107935263 LOC107899206 LOC107935264 BNAA09G07220D LOC106360577 BNAC01G26220D LOC102624811 LOC102615263 LOC4325464 LOC100276063 LOC100272653 LOC123068534 LOC123060057 LOC123077047 LOC123442638 LOC8073315 LOC100827884
Function* probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 uncharacterized protein At3g49720-like uncharacterized protein At3g49720-like uncharacterized protein At3g49720-like putative pectin methylesterase CGR3 putative pectin methylesterase CGR3 putative pectin methylesterase CGR3 uncharacterized protein uncharacterized protein uncharacterized LOC100800870 probable pectin methylesterase CGR3 uncharacterized LOC100778341 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 uncharacterized LOC100276063 uncharacterized LOC100272653 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 uncharacterized protein At3g49720 uncharacterized protein At3g49720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 3
sly01250 Biosynthesis of nucleotide sugars 3
sly00051 Fructose and mannose metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly00670 One carbon pool by folate 2
sly00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly04145 Phagosome 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 4
sot00670 One carbon pool by folate 3
sot01230 Biosynthesis of amino acids 3
sot00999 Biosynthesis of various plant secondary metabolites 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 4
sot04517 IgSF CAM signaling 4
sot04814 Motor proteins 4
sot00541 Biosynthesis of various nucleotide sugars 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04130 SNARE interactions in vesicular transport 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00541 Biosynthesis of various nucleotide sugars 3
bna01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265077 101245514 101256717 102578463 102583825 102588140 107768381 107771745 107828760 824134 836710 100800870 100805476 100778341 103837596 103873032 103875453 100255908 100244559 100243785 7470771 7469664 25482029 11431552 107935263 107899206 107935264 106441240 106360577 106380605 102624811 102615263 4325464 100276063 100272653 123068534 123060057 123077047 123442638 8073315 100827884
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