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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245927   tRNAse Z TRZ4, mitochondrial-like 
 sly-u.5   101243871   tRNase Z TRZ3, mitochondrial 
 ath-u.5   TRZ4   tRNAse Z4 
 ath-u.5   TRZ3   tRNAse Z3 
 gma-u.5   100784996   tRNase Z TRZ3, mitochondrial 
 gma-u.5   100786011   tRNase Z TRZ3, mitochondrial 
 vvi-u.5   100254820   tRNase Z TRZ3, mitochondrial 
 ppo-u.5   7475087   tRNase Z TRZ3, mitochondrial 
 mtr-u.5   11427220   tRNase Z TRZ3, mitochondrial 
 osa-u.5   4324278   tRNase Z TRZ3, mitochondrial 
 zma-u.5   103635013   tRNase Z TRZ3, mitochondrial 

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Top 50 coexpressed genes to 101245927 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245927 (sly-u.5 coexpression data)

CoexMap"101265382"


slyLOC101265382 | Entrez gene ID : 101265382    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990180 [list] [network] mitochondrial tRNA 3'-end processing  (3 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO MF
GO:0042781 [list] [network] 3'-tRNA processing endoribonuclease activity  (3 genes)  IEA  
Protein XP_010312105.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  pero 1,  cysk 1,  mito_plas 1  (predict for XP_010312105.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010312105.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245927

.
sly-u.5
for
101243871

.
ath-u.5
for
TRZ4

.
ath-u.5
for
TRZ3

.
gma-u.5
for
100784996

.
gma-u.5
for
100786011

.
vvi-u.5
for
100254820

.
ppo-u.5
for
7475087

.
mtr-u.5
for
11427220

.
osa-u.5
for
4324278

.
zma-u.5
for
103635013

.


Ortholog ID: 5108
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol TRZ4 TRZ3 LOC100786011 LOC100784996 LOC101243871 LOC4324278 LOC103635013 LOC103871232 LOC103869840 LOC100254820 LOC7475087 LOC11427220 LOC123060809 LOC123069373 LOC123443267 LOC107897490 LOC107913895 LOC106345746 LOC106401888 CHLRE_01g039900v5 LOC8078098 LOC102594613 LOC102596953 LOC102625658 LOC100834590 LOC107789833 LOC107785747
Function* tRNAse Z4 tRNAse Z3 tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNAse Z TRZ4, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial-like tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial tRNAse Z TRZ4, mitochondrial-like uncharacterized protein tRNase Z TRZ3, mitochondrial zinc phosphodiesterase ELAC protein 2 zinc phosphodiesterase ELAC protein 2-like tRNase Z TRZ3, mitochondrial tRNase Z TRZ3, mitochondrial zinc phosphodiesterase ELAC protein 2-like tRNase Z TRZ3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa03420 Nucleotide excision repair 2
osa03013 Nucleocytoplasmic transport 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 3
tae03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03272 Virion - Hepatitis viruses 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00190 Oxidative phosphorylation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820872 841647 100786011 100784996 101243871 4324278 103635013 103871232 103869840 100254820 7475087 11427220 123060809 123069373 123443267 107897490 107913895 106345746 106401888 5715544 8078098 102594613 102596953 102625658 100834590 107789833 107785747
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