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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265585   DEAD-box ATP-dependent RNA helicase 13 
 sly-r.6   101265585   DEAD-box ATP-dependent RNA helicase 13 
 ath-u.5   AT3G16840   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100806018   DEAD-box ATP-dependent RNA helicase 13 
 vvi-u.5   100261404   DEAD-box ATP-dependent RNA helicase 13 
 ppo-u.5   7460001   DEAD-box ATP-dependent RNA helicase 13 
 mtr-u.5   11421104   DEAD-box ATP-dependent RNA helicase 13 
 osa-u.5   4336370   DEAD-box ATP-dependent RNA helicase 13 
 zma-u.5   100383140   uncharacterized LOC100383140 

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Top 50 coexpressed genes to 101265585 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265585 (sly-u.5 coexpression data)

CoexMap"101265585"


slyLOC101265585 | Entrez gene ID : 101265585      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4457 genes)  IEA  
Protein XP_004247775.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1,  cyto_mito 1  (predict for XP_004247775.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_004247775.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265585

.
sly-r.6
for
101265585

.
ath-u.5
for
AT3G16840

.
gma-u.5
for
100806018

.
vvi-u.5
for
100261404

.
ppo-u.5
for
7460001

.
mtr-u.5
for
11421104

.
osa-u.5
for
4336370

.
zma-u.5
for
100383140

.


Ortholog ID: 10773
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G16840 LOC100806018 LOC101265585 LOC4336370 LOC100383140 LOC103839437 LOC100261404 LOC7460001 LOC11421104 LOC123189765 LOC123053880 LOC123427218 LOC107929155 LOC107929073 LOC106396717 LOC111198703 CHLRE_01g022350v5 LOC8075922 LOC102605472 LOC102628715 LOC100840702 LOC107776937 LOC107826921
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 uncharacterized LOC100383140 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 uncharacterized protein DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13 DEAD-box ATP-dependent RNA helicase 13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820937 100806018 101265585 4336370 100383140 103839437 100261404 7460001 11421104 123189765 123053880 123427218 107929155 107929073 106396717 111198703 5715223 8075922 102605472 102628715 100840702 107776937 107826921
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