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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265679   exonuclease DPD1, chloroplastic/mitochondrial 
 sly-r.6   101265679   exonuclease DPD1, chloroplastic/mitochondrial 
 sly-m.5   101265679   exonuclease DPD1, chloroplastic/mitochondrial 
 ath-u.5   DPD1   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100807346   exonuclease DPD1, chloroplastic/mitochondrial 
 gma-u.5   100799702   exonuclease DPD1, chloroplastic/mitochondrial 
 vvi-u.5   100264957   exonuclease DPD1, chloroplastic/mitochondrial 
 ppo-u.5   18098619   exonuclease DPD1, chloroplastic/mitochondrial 
 mtr-u.5   11421359   exonuclease DPD1, chloroplastic/mitochondrial 
 osa-u.5   4337047   exonuclease DPD1, chloroplastic/mitochondrial 
 osa-u.5   4332575   exonuclease DPD1, chloroplastic/mitochondrial 
 zma-u.5   100192533   uncharacterized LOC100192533 

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Top 50 coexpressed genes to 101265679 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265679 (sly-u.5 coexpression data)

CoexMap"101265679"


slyLOC101265679 | Entrez gene ID : 101265679    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006308 [list] [network] DNA catabolic process  (5 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0008296 [list] [network] 3'-5'-DNA exonuclease activity  (8 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4457 genes)  IEA  
Protein XP_004230278.1 [sequence] [blastp]
XP_004230279.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_004230278.1)
chlo 8,  mito 2  (predict for XP_004230279.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_004230278.1)
mito 8  (predict for XP_004230279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265679

.
sly-r.6
for
101265679

.
sly-m.5
for
101265679

.
ath-u.5
for
DPD1

.
gma-u.5
for
100807346

.
gma-u.5
for
100799702

.
vvi-u.5
for
100264957

.
ppo-u.5
for
18098619

.
mtr-u.5
for
11421359

.
osa-u.5
for
4337047

.
osa-u.5
for
4332575

.
zma-u.5
for
100192533

.


Ortholog ID: 7738
Species ath gma sly osa osa zma vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol DPD1 LOC100807346 LOC101265679 LOC4332575 LOC4337047 LOC100192533 LOC100264957 LOC18098619 LOC11421359 LOC123054630 LOC123427788 LOC107899064 LOC107894015 LOC106348703 LOC106390215 CHLRE_05g240100v5 LOC8074728 LOC102594306 LOC102613049 LOC100829347 LOC107760281 LOC107768806
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial uncharacterized LOC100192533 exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial-like exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial-like uncharacterized protein exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial exonuclease DPD1, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath04146 Peroxisome 2
ath00071 Fatty acid degradation 2
ath01212 Fatty acid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 4
gma04142 Lysosome 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi01230 Biosynthesis of amino acids 4
bdi00300 Lysine biosynthesis 3
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
nta04146 Peroxisome 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832752 100807346 101265679 4332575 4337047 100192533 100264957 18098619 11421359 123054630 123427788 107899064 107894015 106348703 106390215 5723270 8074728 102594306 102613049 100829347 107760281 107768806
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