ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101266051	light-inducible protein CPRF2
sly-r.6	101266051	light-inducible protein CPRF2
sly-u.5	101261751	light-inducible protein CPRF2
sot-r.1	102583727	light-inducible protein CPRF2
sot-r.1	102604219	light-inducible protein CPRF2-like
nta-r.1	107810505	light-inducible protein CPRF2
nta-r.1	107775004	light-inducible protein CPRF2
nta-r.1	107804954	light-inducible protein CPRF2
ath-u.5	BZIP25	basic leucine zipper 25
ath-u.5	BZO2H3	bZIP transcription factor family protein
gma-u.5	SBZ1	bZIP transcription factor protein SBZ1
gma-u.5	BZIP104	putative bZIP domain class transcription factor
gma-u.5	BZIP89	bZIP transcription factor bZIP89
bra-r.6	103841365	basic leucine zipper 25
bra-r.6	103854621	basic leucine zipper 63
vvi-u.5	100255566	light-inducible protein CPRF2
vvi-u.5	100261345	light-inducible protein CPRF2
ppo-u.5	18098966	light-inducible protein CPRF2
ppo-u.5	7474606	light-inducible protein CPRF2
ppo-u.5	7476879	light-inducible protein CPRF2
mtr-u.5	25484643	light-inducible protein CPRF2
mtr-u.5	11425681	light-inducible protein CPRF2
ghi-r.1	107889536	light-inducible protein CPRF2
ghi-r.1	107954678	uncharacterized LOC107954678
ghi-r.1	107926753	light-inducible protein CPRF2
bna-r.1	106438120	basic leucine zipper 25
bna-r.1	106382498	basic leucine zipper 63
bna-r.1	111212259	basic leucine zipper 25-like
cit-r.1	102610079	light-inducible protein CPRF2
cit-r.1	102615385	light-inducible protein CPRF2
osa-u.5	107276775	light-inducible protein CPRF2
osa-u.5	4342570	bZIP transcription factor RISBZ1-like
osa-u.5	4334424	bZIP transcription factor RISBZ2-like
zma-u.5	542237	opaque2 heterodimerizing protein 2
zma-u.5	109943557	bZIP transcription factor RISBZ2
zma-u.5	542704	opaque2 heterodimerizing protein 1
tae-r.2	123105411	bZIP transcription factor RISBZ2
tae-r.2	123102303	light-inducible protein CPRF2
tae-r.2	123113682	bZIP transcription factor RISBZ2
hvu-r.1	123452718	bZIP transcription factor RISBZ2-like
hvu-r.1	123452809	light-inducible protein CPRF2-like
sbi-r.1	8070110	light-inducible protein CPRF2
sbi-r.1	8061169	light-inducible protein CPRF2
bdi-r.1	100840761	bZIP transcription factor RISBZ2
bdi-r.1	100834249	light-inducible protein CPRF2
cre-r.1	CHLRE_10g438850v5	uncharacterized protein
cre-r.1	CHLRE_07g318050v5	uncharacterized protein

Top 50 coexpressed genes to 101266051 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101266051 (sly-u.5 coexpression data)

CoexMap"101266051"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1608 genes)

IEA

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity

(1125 genes)

IEA

Protein

XP_004244856.1 [sequence] [blastp]
XP_010324786.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_004244856.1)
nucl 10	(predict for XP_010324786.1)

Subcellular
localization
TargetP

chlo 5, other 5	(predict for XP_004244856.1)
chlo 5, other 5	(predict for XP_010324786.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101266051	sly-r.6 for 101266051	sly-u.5 for 101261751	sot-r.1 for 102583727	sot-r.1 for 102604219	nta-r.1 for 107810505	nta-r.1 for 107775004	nta-r.1 for 107804954	ath-u.5 for BZIP25	ath-u.5 for BZO2H3	gma-u.5 for SBZ1	gma-u.5 for BZIP104	gma-u.5 for BZIP89	bra-r.6 for 103841365	bra-r.6 for 103854621	vvi-u.5 for 100255566	vvi-u.5 for 100261345	ppo-u.5 for 18098966	ppo-u.5 for 7474606	ppo-u.5 for 7476879	mtr-u.5 for 25484643	mtr-u.5 for 11425681	ghi-r.1 for 107889536	ghi-r.1 for 107954678	ghi-r.1 for 107926753	bna-r.1 for 106438120	bna-r.1 for 106382498	bna-r.1 for 111212259	cit-r.1 for 102610079	cit-r.1 for 102615385	osa-u.5 for 107276775	osa-u.5 for 4342570	osa-u.5 for 4334424	zma-u.5 for 542237	zma-u.5 for 109943557	zma-u.5 for 542704	tae-r.2 for 123105411	tae-r.2 for 123102303	tae-r.2 for 123113682	hvu-r.1 for 123452718	hvu-r.1 for 123452809	sbi-r.1 for 8070110	sbi-r.1 for 8061169	bdi-r.1 for 100840761	bdi-r.1 for 100834249	cre-r.1 for CHLRE_10g438850v5	cre-r.1 for CHLRE_07g318050v5

Ortholog

Ortholog ID: 2158

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

BZIP25

BZO2H3

BZIP89

BZIP105

Function^*

light-inducible protein CPRF2

light-inducible protein CPRF2-like

light-inducible protein CPRF2

basic leucine zipper 25

bZIP transcription factor family protein

bZIP transcription factor bZIP89

bZIP transcription factor bZIP105

basic leucine zipper 63

light-inducible protein CPRF2

basic leucine zipper 63

basic leucine zipper 25

light-inducible protein CPRF2

bZIP transcription factor RISBZ1-like

bZIP transcription factor RISBZ2-like

opaque2 heterodimerizing protein 2

bZIP transcription factor RISBZ2

Basic leucine zipper 25

light-inducible protein CPRF2

bZIP transcription factor RISBZ2

bZIP transcription factor RISBZ2-like

light-inducible protein CPRF2-like

light-inducible protein CPRF2

bZIP transcription factor RISBZ2

light-inducible protein CPRF2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	2
sot00561	Glycerolipid metabolism	2
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2
vvi00330	Arginine and proline metabolism	2
vvi00053	Ascorbate and aldarate metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	4
mtr00190	Oxidative phosphorylation	3
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
bna00350	Tyrosine metabolism	4
bna00360	Phenylalanine metabolism	4
bna01240	Biosynthesis of cofactors	4
bna03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	2
tae00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

101266051

101261751

102583727

102604219

107810505

107775004

107804954

824627

832990

778135

778137

103854621

103874593

100255566

100261345

18098966

7474606

7476879

25484643

11425681

107889536

107899158

107894937

106348851

106367764

106410846

102610079

102615385

107276775

4342570

4334424

542237

109943557

100275351

123102303

123110445

123123208

123452718

123452809

8070110

8061169

100840761

100834249

5716001

5726371

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	3	2	2	3	2	3	3	2	3	3	3	2	2	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101266051 (sly-u.5 coexpression data)

Top 50 enrichment test to 101266051 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**