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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252193   transcription factor PRE3 
 sly-u.5   101261116   transcription factor PRE6-like 
 sly-u.5   101246621   transcription factor PRE6-like 
 ath-u.5   BNQ2   BANQUO 2 
 ath-u.5   PRE1   basic helix-loop-helix (bHLH) DNA-binding family protein 
 ath-u.5   KDR   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100787967   transcription factor PRE3 
 gma-u.5   100784537   transcription factor bHLH135-like 
 gma-u.5   100527636   bHLH transcription factor 
 vvi-u.5   100252480   transcription factor PRE6 
 vvi-u.5   100256731   transcription factor PRE6 
 ppo-u.5   7482464   transcription factor PRE1 
 mtr-u.5   112417120   transcription factor PRE6 
 mtr-u.5   11419079   transcription factor PRE6 
 osa-u.5   4330725   transcription factor ILI5 
 osa-u.5   4331778   transcription factor ILI3-like 
 osa-u.5   107278079   transcription factor ILI3 
 zma-u.5   103631776   transcription factor ILI6 
 zma-u.5   100281850   uncharacterized LOC100281850 
 zma-u.5   100284841   uncharacterized LOC100284841 

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Top 50 coexpressed genes to 101252193 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252193 (sly-u.5 coexpression data)

CoexMap"101266898"


slyPRE2 | Entrez gene ID : 101266898      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 3 3 2 1 2 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0040008 [list] [network] regulation of growth  (32 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (499 genes)  IEA  
Protein XP_004233358.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 5,  nucl 4,  chlo 2,  cyto 2  (predict for XP_004233358.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_004233358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252193

.
sly-u.5
for
101261116

.
sly-u.5
for
101246621

.
ath-u.5
for
BNQ2

.
ath-u.5
for
PRE1

.
ath-u.5
for
KDR

.
gma-u.5
for
100787967

.
gma-u.5
for
100784537

.
gma-u.5
for
100527636

.
vvi-u.5
for
100252480

.
vvi-u.5
for
100256731

.
ppo-u.5
for
7482464

.
mtr-u.5
for
112417120

.
mtr-u.5
for
11419079

.
osa-u.5
for
4330725

.
osa-u.5
for
4331778

.
osa-u.5
for
107278079

.
zma-u.5
for
103631776

.
zma-u.5
for
100281850

.
zma-u.5
for
100284841

.


Ortholog ID: 433
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi sbi sot cit bdi bdi
Symbol BS1 LOC100527636 LOC100791371 LOC101261116 LOC101252193 LOC4331778 LOC4340551 LOC100286033 LOC103631776 LOC103846435 LOC103875126 LOC100252480 LOC100256731 LOC7482464 LOC25490501 LOC112417120 LOC123145486 LOC123128372 LOC123401784 LOC107902993 LOC8066431 LOC102591520 LOC102607461 LOC100835617 LOC100821143
Function* activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 bHLH transcription factor transcription factor PRE6 transcription factor PRE6-like transcription factor PRE3 transcription factor ILI3-like transcription factor ILI4-like uncharacterized LOC100286033 transcription factor ILI6 transcription factor PRE2 transcription factor PRE5 transcription factor PRE6 transcription factor PRE6 transcription factor PRE1 transcription factor PRE3 transcription factor PRE6 transcription factor ILI5 transcription factor ILI5 transcription factor ILI5 transcription factor PRE6 transcription factor ILI5 transcription factor PRE6-like transcription factor PRE5 transcription factor ILI4 transcription factor ILI3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00591 Linoleic acid metabolism 4
bra00592 alpha-Linolenic acid metabolism 4
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi00062 Fatty acid elongation 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843791 100527636 100791371 101261116 101252193 4331778 4340551 100286033 103631776 103846435 103875126 100252480 100256731 7482464 25490501 112417120 123145486 123128372 123401784 107902993 8066431 102591520 102607461 100835617 100821143
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