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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101267870   transcription termination factor MTERF9, chloroplastic 
 sly-r.6   101267870   transcription termination factor MTERF9, chloroplastic 
 sot-r.1   102594087   uncharacterized LOC102594087 
 nta-r.1   107829319   transcription termination factor MTERF9, chloroplastic 
 nta-r.1   107784380   transcription termination factor MTERF9, chloroplastic 
 ath-u.5   AT5G55580   Mitochondrial transcription termination factor family protein 
 gma-u.5   102660933   transcription termination factor MTERF9, chloroplastic 
 gma-u.5   100809638   transcription termination factor MTERF9, chloroplastic 
 bra-r.6   103856978   transcription termination factor MTERF9, chloroplastic 
 vvi-u.5   100260706   transcription termination factor MTERF9, chloroplastic 
 ppo-u.5   7485086   transcription termination factor MTERF9, chloroplastic 
 mtr-u.5   11425995   transcription termination factor MTERF9, chloroplastic 
 ghi-r.1   107958650   transcription termination factor MTERF9, chloroplastic 
 ghi-r.1   107894379   transcription termination factor MTERF9, chloroplastic 
 bna-r.1   125600739   transcription termination factor MTERF9, chloroplastic 
 bna-r.1   106345981   transcription termination factor MTERF9, chloroplastic 
 cit-r.1   102620715   transcription termination factor MTERF9, chloroplastic 
 osa-u.5   4343734   transcription termination factor MTERF9, chloroplastic 
 zma-u.5   100285943   uncharacterized LOC100285943 
 tae-r.2   123188126   transcription termination factor MTERF9, chloroplastic 
 tae-r.2   123052281   transcription termination factor MTERF9, chloroplastic 
 tae-r.2   123044419   transcription termination factor MTERF9, chloroplastic 
 hvu-r.1   123425552   transcription termination factor MTERF9, chloroplastic 
 sbi-r.1   8058361   transcription termination factor MTERF9, chloroplastic 
 bdi-r.1   100843823   transcription termination factor MTERF9, chloroplastic 

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Top 50 coexpressed genes to 101267870 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101267870 (sly-u.5 coexpression data)

CoexMap"101267870"


slyLOC101267870 | Entrez gene ID : 101267870      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032502 [list] [network] developmental process  (354 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (545 genes)  IEA  
Protein XP_004251918.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  nucl 1  (predict for XP_004251918.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004251918.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101267870
sly-r.6
for
101267870
sot-r.1
for
102594087
nta-r.1
for
107829319
nta-r.1
for
107784380
ath-u.5
for
AT5G55580
gma-u.5
for
102660933
gma-u.5
for
100809638
bra-r.6
for
103856978
vvi-u.5
for
100260706
ppo-u.5
for
7485086
mtr-u.5
for
11425995
ghi-r.1
for
107958650
ghi-r.1
for
107894379
bna-r.1
for
125600739
bna-r.1
for
106345981
cit-r.1
for
102620715
osa-u.5
for
4343734
zma-u.5
for
100285943
tae-r.2
for
123188126
tae-r.2
for
123052281
tae-r.2
for
123044419
hvu-r.1
for
123425552
sbi-r.1
for
8058361
bdi-r.1
for
100843823


Ortholog ID: 11000
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101267870 LOC102594087 LOC107829319 LOC107784380 AT5G55580 LOC102660933 LOC100809638 LOC103856978 LOC100260706 LOC7485086 LOC11425995 LOC107958650 LOC107894379 LOC125600739 LOC106345981 LOC102620715 LOC4343734 LOC100285943 LOC123188126 LOC123052281 LOC123044419 LOC123425552 LOC8058361 LOC100843823
Function* transcription termination factor MTERF9, chloroplastic uncharacterized LOC102594087 transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic Mitochondrial transcription termination factor family protein transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic uncharacterized LOC100285943 transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101267870 102594087 107829319 107784380 835652 102660933 100809638 103856978 100260706 7485086 11425995 107958650 107894379 125600739 106345981 102620715 4343734 100285943 123188126 123052281 123044419 123425552 8058361 100843823
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