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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102578459   pseudouridine-5'-phosphate glycosidase 
 sly-u.5   101255656   pseudouridine-5'-phosphate glycosidase 
 nta-r.1   107823838   pseudouridine-5'-phosphate glycosidase 
 nta-r.1   107794177   pseudouridine-5'-phosphate glycosidase 
 ath-u.5   AT1G50510   indigoidine synthase A family protein 
 gma-u.5   100795266   pseudouridine-5'-phosphate glycosidase 
 bra-r.6   103871338   pseudouridine-5'-phosphate glycosidase 
 bra-r.6   103868617   pseudouridine-5'-phosphate glycosidase 
 vvi-u.5   100247897   pseudouridine-5'-phosphate glycosidase 
 ppo-u.5   7467984   pseudouridine-5'-phosphate glycosidase 
 mtr-u.5   11424519   pseudouridine-5'-phosphate glycosidase 
 ghi-r.1   121232229   pseudouridine-5'-phosphate glycosidase 
 ghi-r.1   107954308   pseudouridine-5'-phosphate glycosidase 
 bna-r.1   106451661   pseudouridine-5'-phosphate glycosidase 
 bna-r.1   106412011   pseudouridine-5'-phosphate glycosidase 2 
 bna-r.1   125608522   pseudouridine-5'-phosphate glycosidase-like 
 cit-r.1   102608204   pseudouridine-5'-phosphate glycosidase 
 osa-u.5   4345970   pseudouridine-5'-phosphate glycosidase 
 zma-u.5   100282483   pseudouridine-5'-phosphate glycosidase 
 tae-r.2   123084704   pseudouridine-5'-phosphate glycosidase 
 tae-r.2   123093400   pseudouridine-5'-phosphate glycosidase 
 tae-r.2   123098675   pseudouridine-5'-phosphate glycosidase 
 hvu-r.1   123449621   pseudouridine-5'-phosphate glycosidase 
 sbi-r.1   8061374   pseudouridine-5'-phosphate glycosidase 
 bdi-r.1   100825346   pseudouridine-5'-phosphate glycosidase 
 cre-r.1   CHLRE_02g144000v5   uncharacterized protein 

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Top 50 coexpressed genes to 102578459 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102578459 (sot-r.1 coexpression data)

CoexMap"102578459"


sotLOC102578459 | Entrez gene ID : 102578459      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 1 2 1 1 1 2 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00240 [list] [network] Pyrimidine metabolism (69 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0004730 [list] [network] pseudouridylate synthase activity  (2 genes)  IEA  
GO:0016798 [list] [network] hydrolase activity, acting on glycosyl bonds  (423 genes)  IEA  
Protein XP_006356015.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_006356015.1)
Subcellular
localization
TargetP
other 4  (predict for XP_006356015.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102578459
sly-u.5
for
101255656
nta-r.1
for
107823838
nta-r.1
for
107794177
ath-u.5
for
AT1G50510
gma-u.5
for
100795266
bra-r.6
for
103871338
bra-r.6
for
103868617
vvi-u.5
for
100247897
ppo-u.5
for
7467984
mtr-u.5
for
11424519
ghi-r.1
for
121232229
ghi-r.1
for
107954308
bna-r.1
for
106451661
bna-r.1
for
106412011
bna-r.1
for
125608522
cit-r.1
for
102608204
osa-u.5
for
4345970
zma-u.5
for
100282483
tae-r.2
for
123084704
tae-r.2
for
123093400
tae-r.2
for
123098675
hvu-r.1
for
123449621
sbi-r.1
for
8061374
bdi-r.1
for
100825346
cre-r.1
for
CHLRE_02g144000v5


Ortholog ID: 8739
Species sot sly nta nta ath gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102578459 LOC101255656 LOC107823838 LOC107794177 AT1G50510 LOC100795266 LOC103871338 LOC103868617 LOC100247897 LOC7467984 LOC11424519 LOC121232229 LOC107954308 LOC106451661 LOC125608522 LOC106402924 LOC102608204 LOC4345970 LOC100282483 LOC123084704 LOC123093400 LOC123098675 LOC123449621 LOC8061374 LOC100825346 CHLRE_02g144000v5
Function* pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase indigoidine synthase A family protein pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase-like pseudouridine-5'-phosphate glycosidase-like pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase pseudouridine-5'-phosphate glycosidase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04136 Autophagy - other 3
sot04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
ppo01200 Carbon metabolism 3
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 2
cit00592 alpha-Linolenic acid metabolism 2
cit01040 Biosynthesis of unsaturated fatty acids 2
cit01212 Fatty acid metabolism 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae00190 Oxidative phosphorylation 3
tae00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00240 Pyrimidine metabolism 3
tae00230 Purine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102578459 101255656 107823838 107794177 841473 100795266 103871338 103868617 100247897 7467984 11424519 121232229 107954308 106451661 125608522 106402924 102608204 4345970 100282483 123084704 123093400 123098675 123449621 8061374 100825346 66052625
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