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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579005   tRNA modification GTPase MnmE 
 sly-u.5   101246529   uncharacterized LOC101246529 
 ath-u.5   AT1G78010   tRNA modification GTPase 
 gma-u.5   100818096   tRNA modification GTPase MnmE 
 gma-u.5   100779193   tRNA modification GTPase MnmE 
 vvi-u.5   100242149   uncharacterized LOC100242149 
 ppo-u.5   7495139   uncharacterized LOC7495139 
 mtr-u.5   25489409   tRNA modification GTPase MnmE 
 osa-u.5   4345533   uncharacterized LOC4345533 
 zma-u.5   100283042   uncharacterized LOC100283042 

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Top 50 coexpressed genes to 102579005 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579005 (sot-r.1 coexpression data)

CoexMap"102579005"


sotLOC102579005 | Entrez gene ID : 102579005    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002098 [list] [network] tRNA wobble uridine modification  (13 genes)  IEA  
GO:0030488 [list] [network] tRNA methylation  (25 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (756 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (209 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (246 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006354016.1 [sequence] [blastp]
XP_006354017.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 3  (predict for XP_006354016.1)
mito 5,  chlo 4,  cyto_mito 3  (predict for XP_006354017.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_006354016.1)
mito 6,  chlo 4  (predict for XP_006354017.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579005

.
sly-u.5
for
101246529

.
ath-u.5
for
AT1G78010

.
gma-u.5
for
100818096

.
gma-u.5
for
100779193

.
vvi-u.5
for
100242149

.
ppo-u.5
for
7495139

.
mtr-u.5
for
25489409

.
osa-u.5
for
4345533

.
zma-u.5
for
100283042

.


Ortholog ID: 10559
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G78010 LOC100818096 LOC100779193 LOC101246529 LOC4345533 LOC100283042 LOC103832226 LOC100242149 LOC7495139 LOC25489409 LOC123110263 LOC123102123 LOC123397512 LOC107905049 LOC107957725 LOC106354581 LOC106400175 CHLRE_16g681238v5 LOC8070065 LOC102579005 LOC102619189 LOC100834939 LOC107789613 LOC107793520
Function* tRNA modification GTPase tRNA modification GTPase MnmE tRNA modification GTPase MnmE uncharacterized LOC101246529 uncharacterized LOC4345533 uncharacterized LOC100283042 tRNA modification GTPase MnmE uncharacterized LOC100242149 uncharacterized LOC7495139 tRNA modification GTPase MnmE tRNA modification GTPase MnmE tRNA modification GTPase MnmE tRNA modification GTPase MnmE-like tRNA modification GTPase MnmE tRNA modification GTPase MnmE tRNA modification GTPase MnmE tRNA modification GTPase MnmE-like uncharacterized protein tRNA modification GTPase MnmE tRNA modification GTPase MnmE uncharacterized LOC102619189 tRNA modification GTPase MnmE uncharacterized LOC107789613 uncharacterized LOC107793520
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03060 Protein export 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03060 Protein export 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844136 100818096 100779193 101246529 4345533 100283042 103832226 100242149 7495139 25489409 123110263 123102123 123397512 107905049 107957725 106354581 106400175 5724487 8070065 102579005 102619189 100834939 107789613 107793520
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