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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102581685   uncharacterized LOC102581685 
 sly-u.5   101258997   uncharacterized LOC101258997 
 ath-u.5   POLD3   DNA-directed DNA polymerase 
 gma-u.5   100812372   DNA polymerase delta subunit 3 
 gma-u.5   100793247   uncharacterized LOC100793247 
 vvi-u.5   100250468   uncharacterized LOC100250468 
 ppo-u.5   18095449   uncharacterized LOC18095449 
 mtr-u.5   11408397   DNA polymerase delta subunit 3 
 osa-u.5   4327080   uncharacterized LOC4327080 
 zma-u.5   103642327   uncharacterized LOC103642327 
 zma-u.5   100279971   uncharacterized LOC100279971 

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Top 50 coexpressed genes to 102581685 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102581685 (sot-r.1 coexpression data)

CoexMap"102581685"


sotLOC102581685 | Entrez gene ID : 102581685      
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03030 [list] [network] DNA replication (40 genes)
sot03410 [list] [network] Base excision repair (50 genes)
sot03420 [list] [network] Nucleotide excision repair (75 genes)
sot03430 [list] [network] Mismatch repair (31 genes)
sot03440 [list] [network] Homologous recombination (56 genes)
GO BP
GO:1904161 [list] [network] DNA synthesis involved in UV-damage excision repair  (1 genes)  IEA  
GO:0006297 [list] [network] nucleotide-excision repair, DNA gap filling  (4 genes)  IEA  
GO:0006271 [list] [network] DNA strand elongation involved in DNA replication  (14 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (93 genes)  IEA  
GO CC
GO:0043625 [list] [network] delta DNA polymerase complex  (5 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (17 genes)  IEA  
Protein XP_006360034.1 [sequence] [blastp]
XP_006360035.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006360034.1)
nucl 10  (predict for XP_006360035.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006360034.1)
other 7  (predict for XP_006360035.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102581685

.
sly-u.5
for
101258997

.
ath-u.5
for
POLD3

.
gma-u.5
for
100812372

.
gma-u.5
for
100793247

.
vvi-u.5
for
100250468

.
ppo-u.5
for
18095449

.
mtr-u.5
for
11408397

.
osa-u.5
for
4327080

.
zma-u.5
for
103642327

.
zma-u.5
for
100279971

.


Ortholog ID: 8315
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol POLD3 LOC100812372 LOC100793247 LOC101258997 LOC4327080 LOC100279971 LOC103642327 LOC103832343 LOC100250468 LOC18095449 LOC11408397 LOC123077688 LOC123060609 LOC123443095 LOC107917216 LOC107897258 LOC106356007 LOC106354683 CHLRE_03g202250v5 LOC8080502 LOC102581685 LOC102608043 LOC100831421 LOC107792496
Function* DNA-directed DNA polymerase DNA polymerase delta subunit 3 uncharacterized LOC100793247 uncharacterized LOC101258997 uncharacterized LOC4327080 uncharacterized LOC100279971 uncharacterized LOC103642327 DNA polymerase delta subunit 3 uncharacterized LOC100250468 uncharacterized LOC18095449 DNA polymerase delta subunit 3 protein IWS1 homolog A protein IWS1 homolog A nucleolar protein dao-5 uncharacterized LOC107917216 nucleolar and coiled-body phosphoprotein 1 DNA polymerase delta subunit 3 neurofilament heavy polypeptide uncharacterized protein uncharacterized LOC8080502 uncharacterized LOC102581685 uncharacterized LOC102608043 protein IWS1 homolog A uncharacterized LOC107792496
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 12
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 6
osa03440 Homologous recombination 5
osa03030 DNA replication 5
osa03420 Nucleotide excision repair 5
osa03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03430 Mismatch repair 5
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 4
ppo03030 DNA replication 4
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03430 Mismatch repair 6
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 6
cre03420 Nucleotide excision repair 6
cre03430 Mismatch repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844201 100812372 100793247 101258997 4327080 100279971 103642327 103832343 100250468 18095449 11408397 123077688 123060609 123443095 107917216 107897258 106356007 106354683 5718901 8080502 102581685 102608043 100831421 107792496
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