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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102581807   peptide deformylase 1A, chloroplastic 
 sly-u.5   PDF1A   polypeptide deformylase 
 ath-u.5   PDF1A   peptide deformylase 1A 
 gma-u.5   100784292   peptide deformylase 1A, chloroplastic 
 vvi-u.5   100258283   peptide deformylase 1A, chloroplastic/mitochondrial 
 ppo-u.5   7478116   peptide deformylase 1A, chloroplastic/mitochondrial 
 mtr-u.5   25491322   peptide deformylase 1A, chloroplastic 
 mtr-u.5   11442039   peptide deformylase 1A, chloroplastic/mitochondrial 
 osa-u.5   4324565   peptide deformylase 1A, chloroplastic-like 
 zma-u.5   100272955   uncharacterized LOC100272955 

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Top 50 coexpressed genes to 102581807 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102581807 (sot-r.1 coexpression data)

CoexMap"102581807"


sotLOC102581807 | Entrez gene ID : 102581807      
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018206 [list] [network] peptidyl-methionine modification  (9 genes)  IEA  
GO:0031365 [list] [network] N-terminal protein amino acid modification  (13 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (603 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (606 genes)  IEA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IEA  
Protein XP_006359723.1 [sequence] [blastp]
XP_006359724.1 [sequence] [blastp]
XP_006359727.1 [sequence] [blastp]
XP_015170017.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_006359723.1)
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_006359724.1)
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_006359727.1)
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_015170017.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_006359723.1)
mito 6  (predict for XP_006359724.1)
mito 6  (predict for XP_006359727.1)
mito 6  (predict for XP_015170017.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102581807

.
sly-u.5
for
PDF1A

.
ath-u.5
for
PDF1A

.
gma-u.5
for
100784292

.
vvi-u.5
for
100258283

.
ppo-u.5
for
7478116

.
mtr-u.5
for
25491322

.
mtr-u.5
for
11442039

.
osa-u.5
for
4324565

.
zma-u.5
for
100272955

.


Ortholog ID: 8234
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PDF1A LOC100784292 PDF1A LOC4324565 LOC100272955 LOC103872331 LOC103842904 LOC100258283 LOC7478116 LOC11442039 LOC123061301 LOC123065402 LOC123439893 LOC121208205 LOC121222374 LOC106367064 LOC106346664 CHLRE_03g172100v5 LOC8073103 LOC102581807 LOC102630479 LOC100829595 LOC107781142 LOC107810363
Function* peptide deformylase 1A peptide deformylase 1A, chloroplastic polypeptide deformylase peptide deformylase 1A, chloroplastic-like uncharacterized LOC100272955 peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic/mitochondrial uncharacterized protein peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic/mitochondrial peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic peptide deformylase 1A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 8
ath01210 2-Oxocarboxylic acid metabolism 6
ath00290 Valine, leucine and isoleucine biosynthesis 4
ath00660 C5-Branched dibasic acid metabolism 3
ath00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00300 Lysine biosynthesis 3
bra01230 Biosynthesis of amino acids 3
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00290 Valine, leucine and isoleucine biosynthesis 2
bra00770 Pantothenate and CoA biosynthesis 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03015 mRNA surveillance pathway 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03060 Protein export 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838109 100784292 544225 4324565 100272955 103872331 103842904 100258283 7478116 11442039 123061301 123065402 123439893 121208205 121222374 106367064 106346664 66052841 8073103 102581807 102630479 100829595 107781142 107810363
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