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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TCL2   Homeodomain-like superfamily protein 
 gma-u.5   100814431   transcription factor CPC-like 
 bra-r.6   103852047   transcription factor TRY 
 bra-r.6   103853331   MYB-like transcription factor ETC3 
 vvi-u.5   100258469   transcription factor TRY-like 
 vvi-u.5   100233044   transcription factor TRY 
 ppo-u.5   7489814   transcription factor TRY 
 ppo-u.5   18105511   MYB-like transcription factor ETC3 
 mtr-u.5   11432217   transcription factor TRY 
 ghi-r.1   107909796   transcription factor CPC 
 bna-r.1   106443768   MYB-like transcription factor ETC3 
 cit-r.1   127900933   transcription factor CPC-like 
 cit-r.1   102613816   transcription factor CPC 
 cit-r.1   102610227   MYB-like transcription factor ETC3 
 zma-u.5   100278335   MYB-like transcription factor ETC3 
 tae-r.2   123070154   MYB-like transcription factor TCL2 
 tae-r.2   123061511   MYB-like transcription factor TCL2 
 tae-r.2   123078589   MYB-like transcription factor TCL2 
 hvu-r.1   123443899   MYB-like transcription factor TCL2 
 sbi-r.1   8084840   MYB-like transcription factor ETC3 

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Top 50 coexpressed genes to TCL2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TCL2 (ath-u.5 coexpression data)

CoexMap"102584878"


sotLOC102584878 | Entrez gene ID : 102584878    
Species ath gma bra vvi ppo mtr ghi bna cit zma tae hvu sbi nta cre bdi sot sly osa
Paralog 1 1 2 2 2 1 1 1 3 1 3 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030154 [list] [network] cell differentiation  (75 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1516 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (404 genes)  IEA  
Protein XP_006339799.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_006339799.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006339799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
TCL2
gma-u.5
for
100814431
bra-r.6
for
103852047
bra-r.6
for
103853331
vvi-u.5
for
100258469
vvi-u.5
for
100233044
ppo-u.5
for
7489814
ppo-u.5
for
18105511
mtr-u.5
for
11432217
ghi-r.1
for
107909796
bna-r.1
for
106443768
cit-r.1
for
127900933
cit-r.1
for
102613816
cit-r.1
for
102610227
zma-u.5
for
100278335
tae-r.2
for
123070154
tae-r.2
for
123061511
tae-r.2
for
123078589
hvu-r.1
for
123443899
sbi-r.1
for
8084840


Ortholog ID: 1610
Species ath ath gma bra bra vvi vvi ppo ppo ppo mtr ghi ghi cit cit cit zma tae tae tae hvu sbi
Symbol TRY CPC LOC100814431 LOC103852047 LOC103853331 LOC100258469 LOC100233044 LOC7489814 LOC18105511 LOC7457390 LOC11432217 LOC107909796 LOC107923100 LOC127900933 LOC102613816 LOC102610227 LOC100278335 LOC123070154 LOC123061511 LOC123078589 LOC123443899 LOC8084840
Function* Homeodomain-like superfamily protein Homeodomain-like superfamily protein transcription factor CPC-like transcription factor TRY MYB-like transcription factor ETC3 transcription factor TRY-like transcription factor TRY transcription factor TRY MYB-like transcription factor ETC3 transcription factor CPC transcription factor TRY transcription factor CPC transcription factor CPC transcription factor CPC-like transcription factor CPC MYB-like transcription factor ETC3 MYB-like transcription factor ETC3 MYB-like transcription factor TCL2 MYB-like transcription factor TCL2 MYB-like transcription factor TCL2 MYB-like transcription factor TCL2 MYB-like transcription factor ETC3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 5
ppo04517 IgSF CAM signaling 3
ppo04814 Motor proteins 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00943 Isoflavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00360 Phenylalanine metabolism 2
ghi00650 Butanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00360 Phenylalanine metabolism 2
ghi00650 Butanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
tae00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 4
sbi00100 Steroid biosynthesis 2
sbi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835401 819249 100814431 103852047 103853331 100258469 100233044 7489814 18105511 7457390 11432217 107909796 107923100 127900933 102613816 102610227 100278335 123070154 123061511 123078589 123443899 8084840
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