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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102586480   protein SMG7L 
 sly-u.5   101254445   nonsense-mediated mRNA decay factor SMG7-like 
 ath-u.5   AT5G02650   uncharacterized protein 
 ath-u.5   AT1G28260   Telomerase activating protein Est1 
 gma-u.5   100783891   protein SMG7L 
 gma-u.5   100786043   protein SMG7L 
 gma-u.5   100789202   protein SMG7L 
 vvi-u.5   104878439   nonsense-mediated mRNA decay factor SMG7-like 
 ppo-u.5   18103036   nonsense-mediated mRNA decay factor SMG7-like 
 ppo-u.5   7477396   nonsense-mediated mRNA decay factor SMG7-like 
 mtr-u.5   11439284   protein SMG7L 

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Top 50 coexpressed genes to 102586480 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102586480 (sot-r.1 coexpression data)

CoexMap"102586480"


sotLOC102586480 | Entrez gene ID : 102586480      
Species sot sly ath gma vvi ppo mtr nta bna osa tae bdi bra sbi hvu cit zma cre ghi
Paralog 1 1 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (16 genes)  IEA  
GO CC
GO:0005697 [list] [network] telomerase holoenzyme complex  (4 genes)  IEA  
GO MF
GO:0070034 [list] [network] telomerase RNA binding  (6 genes)  IEA  
GO:0042162 [list] [network] telomeric DNA binding  (18 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006347023.1 [sequence] [blastp]
XP_015164139.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_006347023.1)
nucl 7,  cyto 2  (predict for XP_015164139.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006347023.1)
other 9  (predict for XP_015164139.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102586480

.
sly-u.5
for
101254445

.
ath-u.5
for
AT5G02650

.
ath-u.5
for
AT1G28260

.
gma-u.5
for
100783891

.
gma-u.5
for
100786043

.
gma-u.5
for
100789202

.
vvi-u.5
for
104878439

.
ppo-u.5
for
18103036

.
ppo-u.5
for
7477396

.
mtr-u.5
for
11439284

.


Ortholog ID: 11412
Species ath ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT1G28260 AT5G02650 LOC100783891 LOC100815470 LOC101254445 LOC103835338 LOC103838972 LOC104878439 LOC7477396 LOC18103036 LOC11439284 LOC107962170 LOC107901801 LOC106382169 LOC106361691 LOC102586480 LOC102621058 LOC107821190 LOC107766421
Function* Telomerase activating protein Est1 uncharacterized protein protein SMG7L protein SMG7L nonsense-mediated mRNA decay factor SMG7-like protein SMG7L protein SMG7L nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like protein SMG7L protein SMG7L protein SMG7L nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like protein SMG7L nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like nonsense-mediated mRNA decay factor SMG7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00310 Lysine degradation 3
ath00640 Propanoate metabolism 2
ath00785 Lipoic acid metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 6
bra01200 Carbon metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00640 Propanoate metabolism 3
bra00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839720 831848 100783891 100815470 101254445 103835338 103838972 104878439 7477396 18103036 11439284 107962170 107901801 106382169 106361691 102586480 102621058 107821190 107766421
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