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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102589147   nuclear export mediator factor NEMF 
 sly-u.5   101247552   uncharacterized LOC101247552 
 ath-u.5   emb1441   zinc knuckle (CCHC-type) family protein 
 gma-u.5   100807437   nuclear export mediator factor NEMF 
 gma-u.5   100803745   nuclear export mediator factor NEMF 
 vvi-u.5   100267050   uncharacterized LOC100267050 
 vvi-u.5   104879273   uncharacterized LOC104879273 
 ppo-u.5   7471088   uncharacterized LOC7471088 
 mtr-u.5   112419084   nuclear export mediator factor NEMF 
 osa-u.5   4352539   uncharacterized LOC4352539 
 zma-u.5   103650540   nuclear export mediator factor NEMF 

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Top 50 coexpressed genes to 102589147 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102589147 (sot-r.1 coexpression data)

CoexMap"102589147"


sotLOC102589147 | Entrez gene ID : 102589147    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990116 [list] [network] ribosome-associated ubiquitin-dependent protein catabolic process  (2 genes)  IEA  
GO:0072344 [list] [network] rescue of stalled ribosome  (4 genes)  IEA  
GO CC
GO:1990112 [list] [network] RQC complex  (3 genes)  IEA  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (7 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (27 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
Protein XP_006337989.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_006337989.1)
Subcellular
localization
TargetP
other 5  (predict for XP_006337989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102589147

.
sly-u.5
for
101247552

.
ath-u.5
for
emb1441

.
gma-u.5
for
100807437

.
gma-u.5
for
100803745

.
vvi-u.5
for
100267050

.
vvi-u.5
for
104879273

.
ppo-u.5
for
7471088

.
mtr-u.5
for
112419084

.
osa-u.5
for
4352539

.
zma-u.5
for
103650540

.


Ortholog ID: 9725
Species ath gma gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb1441 LOC100807437 LOC100803745 LOC101247552 LOC4352539 LOC103650540 LOC103858423 LOC100267050 LOC104879273 LOC7471088 LOC112419084 LOC123110751 LOC123102560 LOC123451875 LOC107910558 LOC107951586 LOC106388494 LOC111214075 CHLRE_17g734961v5 LOC8068082 LOC102589147 LOC102628947 LOC100835984 LOC107781168 LOC107801564
Function* zinc knuckle (CCHC-type) family protein nuclear export mediator factor NEMF nuclear export mediator factor NEMF uncharacterized LOC101247552 uncharacterized LOC4352539 nuclear export mediator factor NEMF nuclear export mediator factor Nemf uncharacterized LOC100267050 uncharacterized LOC104879273 uncharacterized LOC7471088 nuclear export mediator factor NEMF nuclear export mediator factor Nemf nuclear export mediator factor Nemf nuclear export mediator factor Nemf nuclear export mediator factor Nemf nuclear export mediator factor Nemf ribosome quality control complex subunit NEMF ribosome quality control complex subunit NEMF-like uncharacterized protein nuclear export mediator factor NEMF nuclear export mediator factor NEMF uncharacterized LOC102628947 nuclear export mediator factor NEMF uncharacterized LOC107781168 uncharacterized LOC107801564
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03015 mRNA surveillance pathway 2
nta03083 Polycomb repressive complex 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
nta03015 mRNA surveillance pathway 2
nta03083 Polycomb repressive complex 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835056 100807437 100803745 101247552 4352539 103650540 103858423 100267050 104879273 7471088 112419084 123110751 123102560 123451875 107910558 107951586 106388494 111214075 5722654 8068082 102589147 102628947 100835984 107781168 107801564
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