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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102589983   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 sly-u.5   101262668   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ath-u.5   MCCB   3-methylcrotonyl-CoA carboxylase 
 gma-u.5   100791763   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 gma-u.5   100777651   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 vvi-u.5   100253805   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 ppo-u.5   7457538   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 mtr-u.5   11446438   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 osa-u.5   4345605   methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 
 zma-u.5   100281617   uncharacterized LOC100281617 

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Top 50 coexpressed genes to 102589983 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102589983 (sot-r.1 coexpression data)

CoexMap"102589983"


sotLOC102589983 | Entrez gene ID : 102589983    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00280 [list] [network] Valine, leucine and isoleucine degradation (69 genes)
GO BP
GO:0006552 [list] [network] L-leucine catabolic process  (6 genes)  IEA  
GO CC
GO:1905202 [list] [network] methylcrotonoyl-CoA carboxylase complex  (1 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (603 genes)  IEA  
GO MF
GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity  (2 genes)  IEA  
Protein XP_006346406.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for XP_006346406.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_006346406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102589983

.
sly-u.5
for
101262668

.
ath-u.5
for
MCCB

.
gma-u.5
for
100791763

.
gma-u.5
for
100777651

.
vvi-u.5
for
100253805

.
ppo-u.5
for
7457538

.
mtr-u.5
for
11446438

.
osa-u.5
for
4345605

.
zma-u.5
for
100281617

.


Ortholog ID: 8575
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MCCB LOC100777651 LOC100791763 LOC101262668 LOC4345605 LOC100281617 LOC103862316 LOC103834444 LOC100253805 LOC7457538 LOC11446438 LOC123164970 LOC123148371 LOC123408126 LOC107938005 LOC107953393 LOC106436706 LOC106441143 CHLRE_03g181200v5 LOC8075626 LOC102589983 LOC102619146 LOC100826561 LOC107782183 LOC107776091
Function* 3-methylcrotonyl-CoA carboxylase methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial uncharacterized LOC100281617 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like 3-methylcrotonyl-CoA carboxylase methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 9
ath00640 Propanoate metabolism 5
ath00410 beta-Alanine metabolism 3
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 2
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 7
gma00640 Propanoate metabolism 3
gma00785 Lipoic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00052 Galactose metabolism 3
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 9
osa00640 Propanoate metabolism 5
osa01200 Carbon metabolism 3
osa00410 beta-Alanine metabolism 3
osa00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 10
zma01210 2-Oxocarboxylic acid metabolism 5
zma00640 Propanoate metabolism 3
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 7
bra01200 Carbon metabolism 5
bra00640 Propanoate metabolism 4
bra00410 beta-Alanine metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 6
bra01200 Carbon metabolism 5
bra01210 2-Oxocarboxylic acid metabolism 4
bra00640 Propanoate metabolism 3
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 4
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo01200 Carbon metabolism 3
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr00350 Tyrosine metabolism 4
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
mtr00360 Phenylalanine metabolism 3
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 13
tae00640 Propanoate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 11
hvu00640 Propanoate metabolism 5
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00071 Fatty acid degradation 3
hvu00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00380 Tryptophan metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 8
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 10
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
cre00350 Tyrosine metabolism 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre00360 Phenylalanine metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 7
sot00310 Lysine degradation 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00500 Starch and sucrose metabolism 2
sot00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 3
cit03010 Ribosome 2
cit00650 Butanoate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 7
bdi00640 Propanoate metabolism 4
bdi01200 Carbon metabolism 4
bdi00330 Arginine and proline metabolism 3
bdi00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 6
nta00310 Lysine degradation 4
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829549 100777651 100791763 101262668 4345605 100281617 103862316 103834444 100253805 7457538 11446438 123164970 123148371 123408126 107938005 107953393 106436706 106441143 5728448 8075626 102589983 102619146 100826561 107782183 107776091
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