ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101244375	pectinesterase 1-like
sly-u.5	101243787	pectinesterase 1-like
nta-r.1	107784495	pectinesterase 1-like
nta-r.1	107824774	pectinesterase 1-like
ath-u.5	AT5G07410	Pectin lyase-like superfamily protein
ath-u.5	AT5G07430	Pectin lyase-like superfamily protein
gma-u.5	100306177	putative pectinesterase
gma-u.5	100775404	putative pectinesterase 63
gma-u.5	100786427	pectinesterase PPME1
bna-r.1	106443037	probable pectinesterase 50
bna-r.1	125581528	pectinesterase PPME1-like
cit-r.1	102610921	pectinesterase PPME1-like

functional annotation

KEGG

sot00040 [list] [network] Pentose and glucuronate interconversions (125 genes)

GO BP

GO:0045490 [list] [network] pectin catabolic process	(18 genes)	IEA
GO:0042545 [list] [network] cell wall modification	(67 genes)	IEA

GO CC

GO MF

GO:0030599 [list] [network] pectinesterase activity

(67 genes)

IEA

Protein

XP_006365350.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, chlo 1, vacu 1, E.R. 1, E.R._vacu 1, nucl 1, cyto_nucl 1

(predict for XP_006365350.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_006365350.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101244375	sly-u.5 for 101243787	nta-r.1 for 107784495	nta-r.1 for 107824774	ath-u.5 for AT5G07410	ath-u.5 for AT5G07430	gma-u.5 for 100306177	gma-u.5 for 100775404	gma-u.5 for 100786427	bna-r.1 for 106443037	bna-r.1 for 125581528	cit-r.1 for 102610921

Ortholog ID: 1716

Species

sly

nta

ath

gma

bna

cit

Symbol

PPME1

Function^*

pectinesterase 1-like

Pectin lyase-like superfamily protein

putative pectinesterase

pectinesterase PPME1

probable pectinesterase 50

pectinesterase PPME1-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	9
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	9
ath00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	10
ath00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	6
gma04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

101244375

101243787

107784495

107824774

830632

843331

100306177

100813174

106443037

106379138

102610921


Species	sly	nta	ath	gma	bna	cit	cre	vvi	bra	ppo	mtr	hvu	tae	bdi	osa	zma	ghi	sot	sbi
Paralog	2	2	2	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101244375 (sly-u.5 coexpression data)

Top 50 enrichment test to 101244375 (sly-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101244375 (sly-u.5 coexpression data)

Top 50 enrichment test to 101244375 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**