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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102591006   YTH domain-containing family protein 1 
 sly-u.5   101267743   YTH domain-containing protein ECT1 
 ath-u.5   ECT8   evolutionarily conserved C-terminal region 8 
 gma-u.5   100812429   YTH domain-containing protein ECT2 
 gma-u.5   100800887   YTH domain-containing protein ECT4 
 gma-u.5   100791190   YTH domain-containing protein ECT2 
 vvi-u.5   100249242   YTH domain-containing protein ECT1 
 vvi-u.5   100258644   YTH domain-containing protein ECT1 
 ppo-u.5   7464572   YTH domain-containing protein ECT4 
 ppo-u.5   18111170   YTH domain-containing protein ECT4 
 ppo-u.5   18098317   YTH domain-containing protein ECT1 
 mtr-u.5   11441735   YTH domain-containing protein ECT2 
 osa-u.5   4325283   YTH domain-containing protein ECT2 
 zma-u.5   103651353   evolutionarily conserved C-terminal region 8 
 zma-u.5   100193454   uncharacterized LOC100193454 

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Top 50 coexpressed genes to 102591006 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102591006 (sot-r.1 coexpression data)

CoexMap"102591006"


sotLOC102591006 | Entrez gene ID : 102591006      
Species sot sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi bra sbi tae nta bna
Paralog 1 1 1 3 2 3 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061157 [list] [network] mRNA destabilization  (28 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (296 genes)  IEA  
Protein XP_006349328.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006349328.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006349328.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102591006

.
sly-u.5
for
101267743

.
ath-u.5
for
ECT8

.
gma-u.5
for
100812429

.
gma-u.5
for
100800887

.
gma-u.5
for
100791190

.
vvi-u.5
for
100249242

.
vvi-u.5
for
100258644

.
ppo-u.5
for
7464572

.
ppo-u.5
for
18111170

.
ppo-u.5
for
18098317

.
mtr-u.5
for
11441735

.
osa-u.5
for
4325283

.
zma-u.5
for
103651353

.
zma-u.5
for
100193454

.


Ortholog ID: 5638
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi bna bna sbi sot cit cit bdi nta nta
Symbol ECT8 LOC100800887 LOC100812429 LOC101267743 LOC4325283 LOC103651353 LOC100193454 LOC103832405 LOC103853183 LOC100258644 LOC100249242 LOC7464572 LOC18098317 LOC11441735 LOC123078977 LOC123070566 LOC123444110 LOC107908563 LOC106353409 LOC106356062 LOC8061868 LOC102591006 LOC102620334 LOC102630620 LOC100831633 LOC107775008 LOC107817391
Function* evolutionarily conserved C-terminal region 8 YTH domain-containing protein ECT4 YTH domain-containing protein ECT2 YTH domain-containing protein ECT1 YTH domain-containing protein ECT2 evolutionarily conserved C-terminal region 8 uncharacterized LOC100193454 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2 YTH domain-containing protein ECT1 YTH domain-containing protein ECT1 YTH domain-containing protein ECT4 YTH domain-containing protein ECT1 YTH domain-containing protein ECT2 YTH domain-containing protein ECT1 YTH domain-containing protein ECT3 YTH domain-containing protein ECT3 YTH domain-containing protein ECT1 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2-like uncharacterized LOC8061868 YTH domain-containing family protein 1 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4-like uncharacterized LOC100831633 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 2
gma00561 Glycerolipid metabolism 2
gma00600 Sphingolipid metabolism 2
gma00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma04145 Phagosome 8
gma04142 Lysosome 4
gma00620 Pyruvate metabolism 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04141 Protein processing in endoplasmic reticulum 3
sot03013 Nucleocytoplasmic transport 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
cit04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04070 Phosphatidylinositol signaling system 3
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta03008 Ribosome biogenesis in eukaryotes 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta03008 Ribosome biogenesis in eukaryotes 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844267 100800887 100812429 101267743 4325283 103651353 100193454 103832405 103853183 100258644 100249242 7464572 18098317 11441735 123078977 123070566 123444110 107908563 106353409 106356062 8061868 102591006 102620334 102630620 100831633 107775008 107817391
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