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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102593788   26S proteasome non-ATPase regulatory subunit 2 homolog A-like 
 sly-u.5   101261464   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 sly-u.5   101252199   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 ath-u.5   RPN1A   26S proteasome regulatory subunit S2 1A 
 ath-u.5   RPN1B   26S proteasome regulatory subunit S2 1B 
 gma-u.5   100799779   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 gma-u.5   100777078   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 vvi-u.5   100255701   26S proteasome regulatory subunit N1-like 
 ppo-u.5   18106797   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 ppo-u.5   7469564   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 mtr-u.5   11445486   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4328287   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4341960   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4346741   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 zma-u.5   103654920   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 zma-u.5   100384330   uncharacterized LOC100384330 

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Top 50 coexpressed genes to 102593788 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102593788 (sot-r.1 coexpression data)

CoexMap"102593788"


sotLOC102593788 | Entrez gene ID : 102593788    
Species sot sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi nta cre tae
Paralog 1 2 2 2 1 2 1 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03050 [list] [network] Proteasome (55 genes)
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (28 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (107 genes)  IEA  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (4 genes)  IEA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (6 genes)  IEA  
GO:0000502 [list] [network] proteasome complex  (39 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0030234 [list] [network] enzyme regulator activity  (464 genes)  IEA  
Protein XP_006366302.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  nucl 3,  mito_plas 2,  chlo 1,  cyto 1,  cysk_nucl 1  (predict for XP_006366302.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006366302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102593788
sly-u.5
for
101261464
sly-u.5
for
101252199
ath-u.5
for
RPN1A
ath-u.5
for
RPN1B
gma-u.5
for
100799779
gma-u.5
for
100777078
vvi-u.5
for
100255701
ppo-u.5
for
18106797
ppo-u.5
for
7469564
mtr-u.5
for
11445486
osa-u.5
for
4328287
osa-u.5
for
4341960
osa-u.5
for
4346741
zma-u.5
for
103654920
zma-u.5
for
100384330


Ortholog ID: 3548
Species sot sot sly sly nta nta ath ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa osa zma zma tae tae hvu sbi bdi cre
Symbol LOC102586490 LOC102593788 LOC101252199 LOC101261464 LOC107794282 LOC107789750 RPN1B RPN1A LOC100799779 LOC100777078 LOC103828246 LOC103861833 LOC100255701 LOC18106797 LOC7469564 LOC11445486 LOC107929387 LOC107938468 LOC106440995 LOC106361196 LOC102617825 LOC4328287 LOC4346741 LOC103654920 LOC100384330 LOC123136272 LOC123132233 LOC123411463 LOC8069964 LOC100837709 CHLRE_16g676197v5
Function* 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome regulatory subunit S2 1B 26S proteasome regulatory subunit S2 1A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome regulatory subunit N1-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog B 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A uncharacterized LOC100384330 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 10
sly00970 Aminoacyl-tRNA biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 13
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma03050 Proteasome 6
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03420 Nucleotide excision repair 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 7
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 5
ppo00513 Various types of N-glycan biosynthesis 5
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00020 Citrate cycle (TCA cycle) 4
ppo01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 11
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00010 Glycolysis / Gluconeogenesis 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00010 Glycolysis / Gluconeogenesis 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
cit03050 Proteasome 4
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae04141 Protein processing in endoplasmic reticulum 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
sbi00190 Oxidative phosphorylation 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102586490 102593788 101252199 101261464 107794282 107789750 828964 816580 100799779 100777078 103828246 103861833 100255701 18106797 7469564 11445486 107929387 107938468 106440995 106361196 102617825 4328287 4346741 103654920 100384330 123136272 123132233 123411463 8069964 100837709 5721356
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