ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102593814	phosphomevalonate kinase-like
sly-u.5	PMK1	phosphomevalonate kinase 1
sly-u.5	PMK2	phosphomevalonate kinase 2
ath-u.5	AT1G31910	GHMP kinase family protein
gma-u.5	100818443	phosphomevalonate kinase, peroxisomal
gma-u.5	100810373	phosphomevalonate kinase, peroxisomal
vvi-u.5	100242124	phosphomevalonate kinase, peroxisomal
ppo-u.5	18094109	phosphomevalonate kinase, peroxisomal
ppo-u.5	7456102	phosphomevalonate kinase, peroxisomal
mtr-u.5	11425190	phosphomevalonate kinase, peroxisomal
osa-u.5	4332275	phosphomevalonate kinase, peroxisomal
zma-u.5	100282968	phosphomevalonate kinase
zma-u.5	101060998	phosphomevalonate kinase

functional annotation

KEGG

sot00900 [list] [network] Terpenoid backbone biosynthesis (66 genes)

GO BP

GO:0010142 [list] [network] farnesyl diphosphate biosynthetic process, mevalonate pathway	(5 genes)	IEA
GO:0019287 [list] [network] isopentenyl diphosphate biosynthetic process, mevalonate pathway	(5 genes)	IEA

GO CC

GO:0005777 [list] [network] peroxisome

(88 genes)

IEA

GO MF

GO:0004631 [list] [network] phosphomevalonate kinase activity	(2 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2117 genes)	IEA

Protein

XP_006352929.1 [sequence] [blastp]
XP_015166608.1 [sequence] [blastp]
XP_015166609.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R._plas 3, plas 2, E.R. 2, chlo 1, pero 1, nucl 1, cyto 1, mito 1, cyto_nucl 1	(predict for XP_006352929.1)
E.R._plas 3, plas 2, E.R. 2, chlo 1, pero 1, nucl 1, cyto 1, mito 1, cyto_nucl 1	(predict for XP_015166608.1)
E.R._plas 3, plas 2, E.R. 2, chlo 1, pero 1, nucl 1, cyto 1, mito 1, cyto_nucl 1	(predict for XP_015166609.1)

Subcellular
localization
TargetP

other 5, mito 3	(predict for XP_006352929.1)
other 5, mito 3	(predict for XP_015166608.1)
other 5, mito 3	(predict for XP_015166609.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102593814	sly-u.5 for PMK1	sly-u.5 for PMK2	ath-u.5 for AT1G31910	gma-u.5 for 100818443	gma-u.5 for 100810373	vvi-u.5 for 100242124	ppo-u.5 for 18094109	ppo-u.5 for 7456102	mtr-u.5 for 11425190	osa-u.5 for 4332275	zma-u.5 for 100282968	zma-u.5 for 101060998

Ortholog ID: 8726

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC102593814

LOC102581852

PMK2

PMK1

Function^*

phosphomevalonate kinase-like

probable phosphomevalonate kinase

phosphomevalonate kinase 2

phosphomevalonate kinase 1

phosphomevalonate kinase, peroxisomal

GHMP kinase family protein

phosphomevalonate kinase, peroxisomal

phosphomevalonate kinase

phosphomevalonate kinase, peroxisomal

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00280	Valine, leucine and isoleucine degradation	3
sot00900	Terpenoid backbone biosynthesis	2
sot01230	Biosynthesis of amino acids	2
sot00410	beta-Alanine metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	7
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
sly00900	Terpenoid backbone biosynthesis	5
sly01200	Carbon metabolism	3
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	7
nta00270	Cysteine and methionine metabolism	2
nta00480	Glutathione metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	7
gma00280	Valine, leucine and isoleucine degradation	3
gma00650	Butanoate metabolism	3
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	7
gma00290	Valine, leucine and isoleucine biosynthesis	3
gma01210	2-Oxocarboxylic acid metabolism	3
gma00270	Cysteine and methionine metabolism	3
gma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra03060	Protein export	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	4
ppo01230	Biosynthesis of amino acids	4
ppo00900	Terpenoid backbone biosynthesis	3
ppo00010	Glycolysis / Gluconeogenesis	3
ppo00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	8
mtr00280	Valine, leucine and isoleucine degradation	3
mtr00650	Butanoate metabolism	3
mtr00071	Fatty acid degradation	2
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	12
ghi04146	Peroxisome	2
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	12
ghi04146	Peroxisome	2
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00620	Pyruvate metabolism	3
zma00900	Terpenoid backbone biosynthesis	2
zma00780	Biotin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	10
zma04145	Phagosome	10
zma04142	Lysosome	5
zma00900	Terpenoid backbone biosynthesis	4
zma01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	7
tae00280	Valine, leucine and isoleucine degradation	5
tae00310	Lysine degradation	5
tae00380	Tryptophan metabolism	5
tae00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	9
tae01200	Carbon metabolism	7
tae00280	Valine, leucine and isoleucine degradation	6
tae00310	Lysine degradation	6
tae00380	Tryptophan metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	3
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	10
sbi01200	Carbon metabolism	5
sbi00020	Citrate cycle (TCA cycle)	4
sbi04145	Phagosome	3
sbi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01212	Fatty acid metabolism	7
bdi00620	Pyruvate metabolism	7
bdi01200	Carbon metabolism	7
bdi00061	Fatty acid biosynthesis	6
bdi00010	Glycolysis / Gluconeogenesis	5

Expression

Expression pattern

Entrez Gene ID^*

102593814

102581852

101252616

101256682

107791244

107822239

840081

100818443

100810373

103833683

100242124

18094109

7456102

11425190

107946782

107946659

106418955

106381945

102621350

4332275

100282968

101060998

123092741

123098036

123449138

8078841

100834541

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102593814 (sot-r.1 coexpression data)

Top 50 enrichment test to 102593814 (sot-r.1 coexpression data)


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	nta	cre	tae
Paralog	1	2	1	2	1	2	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102593814 (sot-r.1 coexpression data)

Top 50 enrichment test to 102593814 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**