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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265756   floral homeotic protein FBP1 
 sly-u.5   TPI   floral homeotic protein PISTILLATA-like 
 nta-r.1   107829524   floral homeotic protein GLOBOSA 
 nta-r.1   107812002   floral homeotic protein GLOBOSA-like 
 nta-r.1   107803851   floral homeotic protein PMADS 2 
 ath-u.5   PI   K-box region and MADS-box transcription factor family protein 
 gma-u.5   100817554   floral homeotic protein GLOBOSA-like 
 gma-u.5   100795861   agamous-like MADS-box protein MADS9 
 bra-r.6   103856435   floral homeotic protein PISTILLATA 
 bra-r.6   103851336   floral homeotic protein PISTILLATA 
 vvi-u.5   MADS9   PISTILLATA-like MADS-box protein-like 
 ghi-r.1   107937475   agamous-like MADS-box protein MADS9 
 ghi-r.1   107910365   floral homeotic protein PMADS 2-like 
 ghi-r.1   107930469   floral homeotic protein PMADS 2-like 
 bna-r.1   106385362   floral homeotic protein PISTILLATA 
 bna-r.1   106434682   floral homeotic protein PISTILLATA 
 cit-r.1   102623916   floral homeotic protein GLOBOSA 
 cit-r.1   102624201   agamous-like MADS-box protein MADS9 
 osa-u.5   4325001   MADS-box transcription factor 2-like 
 osa-u.5   4338842   MADS-box transcription factor 4-like 
 zma-u.5   103635643   MADS-box transcription factor 4-like 
 zma-u.5   542020   MADS29 
 zma-u.5   542019   MADS16 
 tae-r.2   123080133   MADS-box transcription factor 2 
 hvu-r.1   123445121   MADS-box transcription factor 2 
 hvu-r.1   123442572   MADS-box transcription factor 4-like 
 sbi-r.1   8058469   MADS-box transcription factor 4 
 bdi-r.1   100841827   MADS-box transcription factor 2 
 bdi-r.1   100825104   MADS-box transcription factor 4-like 
 bdi-r.1   100823553   MADS-box transcription factor 2-like 

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Top 50 coexpressed genes to 101265756 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265756 (sly-u.5 coexpression data)

CoexMap"102595949"


sotLOC102595949 | Entrez gene ID : 102595949      
Species sly nta ath gma bra vvi ghi bna cit osa zma tae hvu sbi bdi cre sot ppo mtr
Paralog 2 3 1 2 2 1 3 2 2 2 3 1 2 1 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (124 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (247 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (559 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1096 genes)  IEA  
Protein XP_006361522.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006361522.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006361522.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265756
sly-u.5
for
TPI
nta-r.1
for
107829524
nta-r.1
for
107812002
nta-r.1
for
107803851
ath-u.5
for
PI
gma-u.5
for
100817554
gma-u.5
for
100795861
bra-r.6
for
103856435
bra-r.6
for
103851336
vvi-u.5
for
MADS9
ghi-r.1
for
107937475
ghi-r.1
for
107910365
ghi-r.1
for
107930469
bna-r.1
for
106385362
bna-r.1
for
106434682
cit-r.1
for
102623916
cit-r.1
for
102624201
osa-u.5
for
4325001
osa-u.5
for
4338842
zma-u.5
for
103635643
zma-u.5
for
542020
zma-u.5
for
542019
tae-r.2
for
123080133
hvu-r.1
for
123445121
hvu-r.1
for
123442572
sbi-r.1
for
8058469
bdi-r.1
for
100841827
bdi-r.1
for
100825104
bdi-r.1
for
100823553


Ortholog ID: 3502
Species sly sly nta nta nta ath gma gma bra bra vvi ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae hvu hvu sbi bdi bdi bdi
Symbol LOC101265756 TPI LOC107829524 LOC107812002 LOC107811598 PI LOC100817554 LOC100499997 LOC103856435 LOC103851336 MADS9 LOC107937475 LOC107930469 LOC107951493 LOC106434682 LOC106439488 LOC111210341 LOC102623916 LOC102624201 LOC4325001 LOC4338842 LOC103635643 LOC542020 LOC542019 LOC123062944 LOC542800 LOC123445121 LOC123442572 LOC8058469 LOC100841827 LOC100825104 LOC100823553
Function* floral homeotic protein FBP1 floral homeotic protein PISTILLATA-like floral homeotic protein GLOBOSA floral homeotic protein GLOBOSA-like floral homeotic protein PMADS 2 K-box region and MADS-box transcription factor family protein floral homeotic protein GLOBOSA-like uncharacterized LOC100499997 floral homeotic protein PISTILLATA floral homeotic protein PISTILLATA PISTILLATA-like MADS-box protein-like agamous-like MADS-box protein MADS9 floral homeotic protein PMADS 2-like agamous-like MADS-box protein MADS9 floral homeotic protein PISTILLATA floral homeotic protein PISTILLATA-like floral homeotic protein PISTILLATA floral homeotic protein GLOBOSA agamous-like MADS-box protein MADS9 MADS-box transcription factor 2-like MADS-box transcription factor 4-like MADS-box transcription factor 4-like MADS29 MADS16 MADS-box transcription factor 2 MADS-box transcription factor 2 MADS-box transcription factor 2 MADS-box transcription factor 4-like MADS-box transcription factor 4 MADS-box transcription factor 2 MADS-box transcription factor 4-like MADS-box transcription factor 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00350 Tyrosine metabolism 2
sly00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
vvi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00062 Fatty acid elongation 2
tae04626 Plant-pathogen interaction 2
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265756 778306 107829524 107812002 107811598 832146 100817554 100499997 103856435 103851336 100232978 107937475 107930469 107951493 106434682 106439488 111210341 102623916 102624201 4325001 4338842 103635643 542020 542019 123062944 542800 123445121 123442572 8058469 100841827 100825104 100823553
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