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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596311   serine/threonine-protein kinase SMG1-like 
 sly-u.5   101268042   uncharacterized LOC101268042 
 nta-r.1   107823315   uncharacterized LOC107823315 
 nta-r.1   107800078   uncharacterized LOC107800078 
 gma-u.5   100808763   serine/threonine-protein kinase SMG1 
 bra-r.6   103844331   serine/threonine-protein kinase SMG1 
 vvi-u.5   100260579   uncharacterized LOC100260579 
 ppo-u.5   18097858   uncharacterized LOC18097858 
 mtr-u.5   11414460   serine/threonine-protein kinase SMG1 
 ghi-r.1   107925423   uncharacterized LOC107925423 
 ghi-r.1   107921970   uncharacterized LOC107921970 
 bna-r.1   106408590   serine/threonine-protein kinase SMG1 
 bna-r.1   106445619   serine/threonine-protein kinase SMG1 
 cit-r.1   102618809   uncharacterized LOC102618809 
 osa-u.5   4334045   uncharacterized LOC4334045 
 zma-u.5   103643975   serine/threonine-protein kinase SMG1 
 tae-r.2   123096059   uncharacterized LOC123096059 
 tae-r.2   123091050   serine/threonine-protein kinase SMG1 
 hvu-r.1   123450226   serine/threonine-protein kinase SMG1-like 
 sbi-r.1   8060503   serine/threonine-protein kinase SMG1 
 bdi-r.1   104581974   serine/threonine-protein kinase SMG1 
 cre-r.1   CHLRE_13g572050v5   uncharacterized protein 

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Top 50 coexpressed genes to 102596311 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596311 (sot-r.1 coexpression data)

CoexMap"102596311"


sotLOC102596311 | Entrez gene ID : 102596311    
Species sot sly nta gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre ath
Paralog 1 1 2 1 1 1 1 1 2 2 1 1 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03015 [list] [network] mRNA surveillance pathway (134 genes)
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (16 genes)  IEA  
GO:0016310 [list] [network] phosphorylation  (1272 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (365 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006346506.1 [sequence] [blastp]
XP_006346507.1 [sequence] [blastp]
XP_006346508.1 [sequence] [blastp]
XP_015163795.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  plas 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_006346506.1)
nucl 4,  chlo 1,  plas 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_006346507.1)
nucl 4,  chlo 1,  plas 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_006346508.1)
nucl 4,  chlo 1,  plas 1,  extr 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_015163795.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_006346506.1)
mito 2  (predict for XP_006346507.1)
mito 2  (predict for XP_006346508.1)
mito 2  (predict for XP_015163795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596311
sly-u.5
for
101268042
nta-r.1
for
107823315
nta-r.1
for
107800078
gma-u.5
for
100808763
bra-r.6
for
103844331
vvi-u.5
for
100260579
ppo-u.5
for
18097858
mtr-u.5
for
11414460
ghi-r.1
for
107925423
ghi-r.1
for
107921970
bna-r.1
for
106408590
bna-r.1
for
106445619
cit-r.1
for
102618809
osa-u.5
for
4334045
zma-u.5
for
103643975
tae-r.2
for
123096059
tae-r.2
for
123091050
hvu-r.1
for
123450226
sbi-r.1
for
8060503
bdi-r.1
for
104581974
cre-r.1
for
CHLRE_13g572050v5


Ortholog ID: 11197
Species sot sly nta nta gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC102596311 LOC101268042 LOC107823315 LOC107800078 LOC100808763 LOC103844331 LOC100260579 LOC18097858 LOC11414460 LOC107925423 LOC107921970 LOC106408590 LOC106445619 LOC102618809 LOC4334045 LOC103643975 LOC123091050 LOC123086925 LOC123450226 LOC8060503 LOC104581974 CHLRE_13g572050v5
Function* serine/threonine-protein kinase SMG1-like uncharacterized LOC101268042 uncharacterized LOC107823315 uncharacterized LOC107800078 serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1 uncharacterized LOC100260579 uncharacterized LOC18097858 serine/threonine-protein kinase SMG1 uncharacterized LOC107925423 uncharacterized LOC107921970 serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1 uncharacterized LOC102618809 uncharacterized LOC4334045 serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1-like serine/threonine-protein kinase SMG1 serine/threonine-protein kinase SMG1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna04120 Ubiquitin mediated proteolysis 4
bna04146 Peroxisome 3
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03082 ATP-dependent chromatin remodeling 3
bna02010 ABC transporters 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi03018 RNA degradation 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102596311 101268042 107823315 107800078 100808763 103844331 100260579 18097858 11414460 107925423 107921970 106408590 106445619 102618809 4334045 103643975 123091050 123086925 123450226 8060503 104581974 5719158
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