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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596336   elongator complex protein 4 
 sly-u.5   101253042   elongator complex protein 4 
 ath-u.5   ELO1   Paxneb protein-like protein 
 gma-u.5   100799237   PAXNEB superfamily protein 
 vvi-u.5   100257804   elongator complex protein 4 
 ppo-u.5   7474439   elongator complex protein 4 
 mtr-u.5   25500105   elongator complex protein 4 
 osa-u.5   4341622   elongator complex protein 4 
 zma-u.5   100192820   uncharacterized LOC100192820 

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Top 50 coexpressed genes to 102596336 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596336 (sot-r.1 coexpression data)

CoexMap"102596336"


sotLOC102596336 | Entrez gene ID : 102596336      
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002098 [list] [network] tRNA wobble uridine modification  (13 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (7 genes)  IEA  
GO:0008023 [list] [network] transcription elongation factor complex  (23 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
Protein XP_015166714.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  cyto_mito 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_015166714.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_015166714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596336
sly-u.5
for
101253042
ath-u.5
for
ELO1
gma-u.5
for
100799237
vvi-u.5
for
100257804
ppo-u.5
for
7474439
mtr-u.5
for
25500105
osa-u.5
for
4341622
zma-u.5
for
100192820


Ortholog ID: 10756
Species sot sly nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae hvu sbi bdi cre
Symbol LOC102596336 LOC101253042 LOC107773993 ELO1 LOC100799237 LOC103870366 LOC100257804 LOC7474439 LOC25500105 LOC107933501 LOC107945346 LOC106452542 LOC111215753 LOC102612498 LOC4341622 LOC100192820 LOC123149585 LOC123407477 LOC8058391 LOC100828270 CHLRE_03g196000v5
Function* elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 Paxneb protein-like protein PAXNEB superfamily protein elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 uncharacterized LOC100192820 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 elongator complex protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00650 Butanoate metabolism 3
tae00660 C5-Branched dibasic acid metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102596336 101253042 107773993 820292 100799237 103870366 100257804 7474439 25500105 107933501 107945346 106452542 111215753 102612498 4341622 100192820 123149585 123407477 8058391 100828270 5718753
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