ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102580061	elongation of fatty acids protein 3-like
sot-r.1	102595316	elongation of fatty acids protein 3-like
sly-u.5	101263656	fatty acid elongase 3-like
sly-u.5	101253978	fatty acid elongase 3-like
nta-r.1	107771861	fatty acid elongase 3-like
nta-r.1	107826684	fatty acid elongase 3-like
nta-r.1	107778850	fatty acid elongase 3-like
ath-u.5	HOS3-1	GNS1/SUR4 membrane protein family
ath-u.5	AT1G75000	GNS1/SUR4 membrane protein family
gma-u.5	121173729	elongation of fatty acids protein 3-like
gma-u.5	100790930	elongation of fatty acids protein 3-like
gma-u.5	100787513	elongation of fatty acids protein 3-like
bra-r.6	103831959	elongation of fatty acids protein 3-like
vvi-u.5	100246092	elongation of fatty acids protein 3-like
vvi-u.5	100264245	elongation of fatty acids protein 3-like
ppo-u.5	7478004	elongation of fatty acids protein 3-like
mtr-u.5	11408283	elongation of fatty acids protein 3-like
mtr-u.5	25490171	elongation of fatty acids protein 3-like
ghi-r.1	107905368	elongation of fatty acids protein 3-like
ghi-r.1	107909365	elongation of fatty acids protein 3-like
bna-r.1	106354528	elongation of fatty acids protein 3-like
bna-r.1	106403132	elongation of fatty acids protein 3-like
bna-r.1	106409284	elongation of fatty acids protein 3-like
cit-r.1	102620143	elongation of fatty acids protein 3-like
cit-r.1	102627597	elongation of fatty acids protein 3-like
osa-u.5	4352887	fatty acid elongase 3-like
zma-u.5	100281858	uncharacterized LOC100281858
tae-r.2	123106317	elongation of fatty acids protein 3-like
tae-r.2	123115417	elongation of fatty acids protein 3-like
tae-r.2	123124090	elongation of fatty acids protein 3-like
hvu-r.1	123397850	elongation of fatty acids protein 3-like
hvu-r.1	123410159	elongation of fatty acids protein 3-like
sbi-r.1	8071533	elongation of fatty acids protein 3-like
bdi-r.1	104584344	elongation of fatty acids protein 3-like
bdi-r.1	104585379	uncharacterized LOC104585379

Top 50 coexpressed genes to 102580061 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102580061 (sot-r.1 coexpression data)

CoexMap"102597131"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0019367 [list] [network] fatty acid elongation, saturated fatty acid	(5 genes)	IEA
GO:0034625 [list] [network] fatty acid elongation, monounsaturated fatty acid	(5 genes)	IEA
GO:0034626 [list] [network] fatty acid elongation, polyunsaturated fatty acid	(5 genes)	IEA
GO:0042761 [list] [network] very long-chain fatty acid biosynthetic process	(9 genes)	IEA
GO:0030148 [list] [network] sphingolipid biosynthetic process	(26 genes)	IEA

GO CC

GO:0005789 [list] [network] endoplasmic reticulum membrane

(217 genes)

IEA

GO MF

GO:0009922 [list] [network] fatty acid elongase activity

(5 genes)

IEA

Protein

XP_006338760.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3

(predict for XP_006338760.1)

Subcellular
localization
TargetP

other 8

(predict for XP_006338760.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102580061	sot-r.1 for 102595316	sly-u.5 for 101263656	sly-u.5 for 101253978	nta-r.1 for 107771861	nta-r.1 for 107826684	nta-r.1 for 107778850	ath-u.5 for HOS3-1	ath-u.5 for AT1G75000	gma-u.5 for 121173729	gma-u.5 for 100790930	gma-u.5 for 100787513	bra-r.6 for 103831959	vvi-u.5 for 100246092	vvi-u.5 for 100264245	ppo-u.5 for 7478004	mtr-u.5 for 11408283	mtr-u.5 for 25490171	ghi-r.1 for 107905368	ghi-r.1 for 107909365	bna-r.1 for 106354528	bna-r.1 for 106403132	bna-r.1 for 106409284	cit-r.1 for 102620143	cit-r.1 for 102627597	osa-u.5 for 4352887	zma-u.5 for 100281858	tae-r.2 for 123106317	tae-r.2 for 123115417	tae-r.2 for 123124090	hvu-r.1 for 123397850	hvu-r.1 for 123410159	sbi-r.1 for 8071533	bdi-r.1 for 104584344	bdi-r.1 for 104585379

Ortholog

Ortholog ID: 3372

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

HOS3-1

Function^*

elongation of fatty acids protein 3-like

fatty acid elongase 3-like

GNS1/SUR4 membrane protein family

elongation of fatty acids protein 3-like

fatty acid elongase 3-like

uncharacterized LOC100281858

elongation of fatty acids protein 3-like

uncharacterized LOC104585379

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	4
nta04626	Plant-pathogen interaction	2
nta00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00380	Tryptophan metabolism	3
ath00966	Glucosinolate biosynthesis	3
ath01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	3
gma00561	Glycerolipid metabolism	3
gma00566	Sulfoquinovose metabolism	3
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01240	Biosynthesis of cofactors	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00051	Fructose and mannose metabolism	2
vvi00280	Valine, leucine and isoleucine degradation	2
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	8
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	2
bna00564	Glycerophospholipid metabolism	2
bna00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00440	Phosphonate and phosphinate metabolism	2
bna00564	Glycerophospholipid metabolism	2
bna00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00380	Tryptophan metabolism	3
cit00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

102580061

102595316

101263656

101253978

107778850

107777462

107803417

829836

843838

121173729

100790930

100787513

103831959

100246092

100264245

7478004

11408283

25482098

121215278

106354528

106403132

106409284

102620143

102627597

4352887

100281858

123106317

123115417

123124090

123397850

123410159

8071533

104584344

104585379

The preparation time of this page was 0.2 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	3	2	3	1	2	1	2	2	3	2	1	1	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102580061 (sot-r.1 coexpression data)

Top 50 enrichment test to 102580061 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**