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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102597552   signal recognition particle 9 kDa protein 
 sly-u.5   101254464   signal recognition particle 9 kDa protein 
 ath-u.5   AT3G49100   Signal recognition particle, SRP9/SRP14 subunit 
 gma-u.5   100811012   signal recognition particle 9 kDa protein 
 gma-u.5   100788603   signal recognition particle 9 kDa protein 
 gma-u.5   100776490   signal recognition particle 9 kDa protein 
 vvi-u.5   100252725   signal recognition particle 9 kDa protein 
 ppo-u.5   7471995   signal recognition particle 9 kDa protein 
 ppo-u.5   7454329   signal recognition particle 9 kDa protein 
 mtr-u.5   25484339   signal recognition particle 9 kDa protein 
 osa-u.5   4340680   signal recognition particle 9 kDa protein 
 zma-u.5   542750   signal recognition particle protein subunit 9 
 zma-u.5   100216656   Signal recognition particle protein 

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Top 50 coexpressed genes to 102597552 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102597552 (sot-r.1 coexpression data)

CoexMap"102597552"


sotLOC102597552 | Entrez gene ID : 102597552    
Species sot sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi bra sbi tae nta bna
Paralog 1 1 1 3 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03060 [list] [network] Protein export (59 genes)
GO BP
GO:0045900 [list] [network] negative regulation of translational elongation  (2 genes)  IEA  
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (16 genes)  IEA  
GO CC
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (11 genes)  IEA  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (12 genes)  IEA  
Protein XP_006349791.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  plas 1,  chlo_mito 1  (predict for XP_006349791.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006349791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102597552

.
sly-u.5
for
101254464

.
ath-u.5
for
AT3G49100

.
gma-u.5
for
100811012

.
gma-u.5
for
100788603

.
gma-u.5
for
100776490

.
vvi-u.5
for
100252725

.
ppo-u.5
for
7471995

.
ppo-u.5
for
7454329

.
mtr-u.5
for
25484339

.
osa-u.5
for
4340680

.
zma-u.5
for
542750

.
zma-u.5
for
100216656

.


Ortholog ID: 6893
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT3G49100 LOC100811012 LOC100776490 LOC101254464 LOC4340680 LOC542750 LOC100216656 LOC103873088 LOC103873502 LOC100252725 LOC7454329 LOC7471995 LOC25484339 LOC123160076 LOC123150731 LOC123411626 LOC107922991 LOC121219926 LOC106387837 LOC106449025 CHLRE_12g546250v5 LOC8065748 LOC102597552 LOC102627275 LOC100840601 LOC107793113
Function* Signal recognition particle, SRP9/SRP14 subunit signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle protein subunit 9 Signal recognition particle protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein-like signal recognition particle 9 kDa protein uncharacterized protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein signal recognition particle 9 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 4
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma03060 Protein export 3
zma00190 Oxidative phosphorylation 3
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04142 Lysosome 4
bra04145 Phagosome 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03040 Spliceosome 3
vvi03018 RNA degradation 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00190 Oxidative phosphorylation 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03060 Protein export 4
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae03060 Protein export 3
tae04120 Ubiquitin mediated proteolysis 2
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03060 Protein export 3
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03060 Protein export 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04145 Phagosome 3
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna03060 Protein export 4
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna03060 Protein export 4
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 4
sot04142 Lysosome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit03060 Protein export 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
bdi03040 Spliceosome 3
bdi03050 Proteasome 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824071 100811012 100776490 101254464 4340680 542750 100216656 103873088 103873502 100252725 7454329 7471995 25484339 123160076 123150731 123411626 107922991 121219926 106387837 106449025 5719583 8065748 102597552 102627275 100840601 107793113
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