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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102597784   probable E3 ubiquitin-protein ligase LUL4 
 sot-r.1   102585008   probable E3 ubiquitin-protein ligase LUL4 
 sot-r.1   102587358   probable E3 ubiquitin-protein ligase LOG2 
 sot-r.1   102594177   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101248607   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101268819   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101247573   probable E3 ubiquitin-protein ligase LOG2 
 nta-r.1   107831787   putative E3 ubiquitin-protein ligase LUL4 
 nta-r.1   107764583   putative E3 ubiquitin-protein ligase LUL4 
 nta-r.1   107787370   putative E3 ubiquitin-protein ligase LUL4 
 ath-u.5   LUL4   RING/U-box superfamily protein 
 ath-u.5   LOG2   RING/U-box superfamily protein 
 ath-u.5   LUL2   RING/U-box superfamily protein 
 gma-u.5   100807343   probable E3 ubiquitin-protein ligase LOG2 
 gma-u.5   100783831   probable E3 ubiquitin-protein ligase LOG2 
 gma-u.5   100789032   probable E3 ubiquitin-protein ligase LOG2 
 bra-r.6   103847936   probable E3 ubiquitin-protein ligase LOG2 
 bra-r.6   103854457   probable E3 ubiquitin-protein ligase LUL4 
 bra-r.6   103850480   probable E3 ubiquitin-protein ligase LUL1 
 vvi-u.5   100260106   probable E3 ubiquitin-protein ligase LOG2 
 vvi-u.5   100852866   probable E3 ubiquitin-protein ligase LUL3 
 vvi-u.5   100266660   probable E3 ubiquitin-protein ligase LUL4 
 ppo-u.5   18100200   probable E3 ubiquitin-protein ligase LOG2 
 ppo-u.5   18098808   probable E3 ubiquitin-protein ligase LUL4 
 ppo-u.5   7486475   probable E3 ubiquitin-protein ligase LOG2 
 mtr-u.5   11423275   probable E3 ubiquitin-protein ligase LOG2 
 mtr-u.5   25484017   probable E3 ubiquitin-protein ligase LOG2 
 mtr-u.5   25486085   probable E3 ubiquitin-protein ligase LUL3 
 ghi-r.1   107892672   probable E3 ubiquitin-protein ligase LUL4 
 ghi-r.1   121209543   probable E3 ubiquitin-protein ligase LOG2 
 ghi-r.1   107899650   probable E3 ubiquitin-protein ligase LOG2 
 bna-r.1   106452764   probable E3 ubiquitin-protein ligase LOG2 
 bna-r.1   125609103   probable E3 ubiquitin-protein ligase LOG2 
 bna-r.1   125585627   probable E3 ubiquitin-protein ligase LOG2 
 cit-r.1   102631259   probable E3 ubiquitin-protein ligase LOG2 
 cit-r.1   102607291   probable E3 ubiquitin-protein ligase LOG2 
 cit-r.1   102629229   probable E3 ubiquitin-protein ligase LUL4 
 osa-u.5   9266835   probable E3 ubiquitin-protein ligase LUL4 
 osa-u.5   4348266   probable E3 ubiquitin-protein ligase LOG2 
 osa-u.5   4332287   probable E3 ubiquitin-protein ligase LOG2 
 zma-u.5   100381407   uncharacterized LOC100381407 
 zma-u.5   103630329   probable E3 ubiquitin-protein ligase LUL3 
 zma-u.5   103633744   probable E3 ubiquitin-protein ligase LUL2 
 tae-r.2   123131839   probable E3 ubiquitin-protein ligase LUL4 
 tae-r.2   123149280   probable E3 ubiquitin-protein ligase LOG2 
 tae-r.2   123085317   probable E3 ubiquitin-protein ligase LUL2 
 hvu-r.1   123449124   probable E3 ubiquitin-protein ligase LUL2 
 hvu-r.1   123442058   probable E3 ubiquitin-protein ligase LUL4 
 hvu-r.1   123408332   probable E3 ubiquitin-protein ligase LOG2 
 sbi-r.1   8085095   probable E3 ubiquitin-protein ligase LUL3 
 sbi-r.1   8078837   probable E3 ubiquitin-protein ligase LUL2 
 bdi-r.1   100842127   probable E3 ubiquitin-protein ligase LOG2 
 bdi-r.1   100829291   probable E3 ubiquitin-protein ligase LUL4 
 bdi-r.1   100831887   probable E3 ubiquitin-protein ligase LUL2 
 cre-r.1   CHLRE_03g173900v5   uncharacterized protein 
 cre-r.1   CHLRE_03g145847v5   uncharacterized protein 

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Top 50 coexpressed genes to 102597784 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102597784 (sot-r.1 coexpression data)

CoexMap"102597784"


sotLOC102597784 | Entrez gene ID : 102597784    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (305 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (217 genes)  IEA  
Protein XP_006339403.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  pero 4,  nucl 1,  mito 1  (predict for XP_006339403.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_006339403.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102597784
sot-r.1
for
102585008
sot-r.1
for
102587358
sot-r.1
for
102594177
sly-u.5
for
101248607
sly-u.5
for
101268819
sly-u.5
for
101247573
nta-r.1
for
107831787
nta-r.1
for
107764583
nta-r.1
for
107787370
ath-u.5
for
LUL4
ath-u.5
for
LOG2
ath-u.5
for
LUL2
gma-u.5
for
100807343
gma-u.5
for
100783831
gma-u.5
for
100789032
bra-r.6
for
103847936
bra-r.6
for
103854457
bra-r.6
for
103850480
vvi-u.5
for
100260106
vvi-u.5
for
100852866
vvi-u.5
for
100266660
ppo-u.5
for
18100200
ppo-u.5
for
18098808
ppo-u.5
for
7486475
mtr-u.5
for
11423275
mtr-u.5
for
25484017
mtr-u.5
for
25486085
ghi-r.1
for
107892672
ghi-r.1
for
121209543
ghi-r.1
for
107899650
bna-r.1
for
106452764
bna-r.1
for
125609103
bna-r.1
for
125585627
cit-r.1
for
102631259
cit-r.1
for
102607291
cit-r.1
for
102629229
osa-u.5
for
9266835
osa-u.5
for
4348266
osa-u.5
for
4332287
zma-u.5
for
100381407
zma-u.5
for
103630329
zma-u.5
for
103633744
tae-r.2
for
123131839
tae-r.2
for
123149280
tae-r.2
for
123085317
hvu-r.1
for
123449124
hvu-r.1
for
123442058
hvu-r.1
for
123408332
sbi-r.1
for
8085095
sbi-r.1
for
8078837
bdi-r.1
for
100842127
bdi-r.1
for
100829291
bdi-r.1
for
100831887
cre-r.1
for
CHLRE_03g173900v5
cre-r.1
for
CHLRE_03g145847v5


Ortholog ID: 842
Species sot sot sot sly sly sly nta nta nta ath ath ath gma gma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol LOC102594177 LOC102583568 LOC107060872 LOC101268819 LOC101247573 LOC101055522 LOC107764583 LOC107787370 LOC107792210 LUL4 LUL1 LUL3 LOC100789032 LOC100784713 LOC103847936 LOC103854457 LOC103870520 LOC100260106 LOC100852866 LOC100250186 LOC18098808 LOC7486475 LOC7454248 LOC11423275 LOC25484017 LOC25486085 LOC107899650 LOC107948357 LOC107891126 LOC106452764 LOC106360584 LOC106427951 LOC102631259 LOC102607291 LOC102629229 LOC9266835 LOC4348266 LOC4325441 LOC100381407 LOC103633744 LOC109939520 LOC123085317 LOC123165236 LOC123161381 LOC123449124 LOC123442058 LOC123408332 LOC8085095 LOC8078837 LOC100842127 LOC100829291 LOC100831887 CHLRE_03g173900v5 CHLRE_03g145847v5
Function* probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 leucine-rich repeat extensin-like protein 3 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 Hop-interacting protein THI037 putative E3 ubiquitin-protein ligase LUL4 putative E3 ubiquitin-protein ligase LUL4 putative E3 ubiquitin-protein ligase LUL4 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL3 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL3 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL1 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL2 uncharacterized LOC100381407 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL3 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LUL2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04142 Lysosome 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta04141 Protein processing in endoplasmic reticulum 2
nta04142 Lysosome 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 5
bra00640 Propanoate metabolism 3
bra00410 beta-Alanine metabolism 3
bra01200 Carbon metabolism 3
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
vvi04144 Endocytosis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 3
mtr00190 Oxidative phosphorylation 3
mtr01200 Carbon metabolism 3
mtr00270 Cysteine and methionine metabolism 2
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi00071 Fatty acid degradation 2
ghi00592 alpha-Linolenic acid metabolism 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 8
zma04517 IgSF CAM signaling 8
zma05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 5
sbi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04075 Plant hormone signal transduction 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102594177 102583568 107060872 101268819 101247573 101055522 107764583 107787370 107792210 819787 831908 832027 100789032 100784713 103847936 103854457 103870520 100260106 100852866 100250186 18098808 7486475 7454248 11423275 25484017 25486085 107899650 107948357 107891126 106452764 106360584 106427951 102631259 102607291 102629229 9266835 4348266 4325441 100381407 103633744 109939520 123085317 123165236 123161381 123449124 123442058 123408332 8085095 8078837 100842127 100829291 100831887 5728890 66052683
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