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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102598288   ubiquitin carboxyl-terminal hydrolase 12-like 
 sly-u.5   101266987   ubiquitin C-terminal hydrolase 12 
 sly-u.5   101248777   ubiquitin C-terminal hydrolase 12-like 
 sly-u.5   101257631   ubiquitin C-terminal hydrolase 13-like 
 ath-u.5   UBP13   ubiquitin-specific protease 13 
 ath-u.5   UBP12   ubiquitin-specific protease 12 
 gma-u.5   100778442   ubiquitin C-terminal hydrolase 12 
 gma-u.5   100800328   ubiquitin C-terminal hydrolase 12 
 gma-u.5   100337655   ubiquitin specific protease 12 
 vvi-u.5   100266796   ubiquitin C-terminal hydrolase 12 
 vvi-u.5   100252573   ubiquitin C-terminal hydrolase 12 
 vvi-u.5   100244518   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7455616   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7491593   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7486860   ubiquitin C-terminal hydrolase 12 
 mtr-u.5   11418867   ubiquitin carboxyl-terminal hydrolase 12 
 mtr-u.5   11432874   ubiquitin carboxyl-terminal hydrolase 13 
 mtr-u.5   11443023   ubiquitin carboxyl-terminal hydrolase 13 
 osa-u.5   4342469   ubiquitin C-terminal hydrolase 12 
 osa-u.5   4352242   ubiquitin C-terminal hydrolase 12 
 osa-u.5   4324616   ubiquitin C-terminal hydrolase 13 
 zma-u.5   100383306   ubiquitin carboxyl-terminal hydrolase 12 
 zma-u.5   100383827   Ubiquitin carboxyl-terminal hydrolase 13 
 zma-u.5   100194235   uncharacterized LOC100194235 

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Top 50 coexpressed genes to 102598288 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102598288 (sot-r.1 coexpression data)

CoexMap"102598288"


sotLOC102598288 | Entrez gene ID : 102598288    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 3 2 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03083 [list] [network] Polycomb repressive complex (84 genes)
GO BP
GO:0031647 [list] [network] regulation of protein stability  (15 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (70 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (756 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (58 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006350937.1 [sequence] [blastp]
XP_006350938.1 [sequence] [blastp]
XP_006350939.1 [sequence] [blastp]
XP_006350940.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for XP_006350937.1)
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for XP_006350938.1)
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for XP_006350939.1)
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for XP_006350940.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006350937.1)
other 8  (predict for XP_006350938.1)
other 8  (predict for XP_006350939.1)
other 8  (predict for XP_006350940.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102598288

.
sly-u.5
for
101266987

.
sly-u.5
for
101248777

.
sly-u.5
for
101257631

.
ath-u.5
for
UBP13

.
ath-u.5
for
UBP12

.
gma-u.5
for
100778442

.
gma-u.5
for
100800328

.
gma-u.5
for
100337655

.
vvi-u.5
for
100266796

.
vvi-u.5
for
100252573

.
vvi-u.5
for
100244518

.
ppo-u.5
for
7455616

.
ppo-u.5
for
7491593

.
ppo-u.5
for
7486860

.
mtr-u.5
for
11418867

.
mtr-u.5
for
11432874

.
mtr-u.5
for
11443023

.
osa-u.5
for
4342469

.
osa-u.5
for
4352242

.
osa-u.5
for
4324616

.
zma-u.5
for
100383306

.
zma-u.5
for
100383827

.
zma-u.5
for
100194235

.


Ortholog ID: 900
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol UBP12 UBP13 LOC100800328 LOC100810922 LOC101248777 LOC101266987 LOC4324616 LOC9270404 LOC100381748 LOC100383306 LOC103845922 LOC103855679 LOC100244518 LOC100266796 LOC7491593 LOC7469919 LOC11443023 LOC11432874 LOC123110922 LOC123052820 LOC123444525 LOC123395413 LOC107899198 LOC121214020 LOC106426392 LOC106452507 CHLRE_07g336200v5 LOC8071953 LOC8063275 LOC102602101 LOC102598288 LOC102619247 LOC102619605 LOC100834129 LOC100831891 LOC107804674 LOC107760390
Function* ubiquitin-specific protease 12 ubiquitin-specific protease 13 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 Ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 13-like ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 13 uncharacterized protein ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13-like ubiquitin carboxyl-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 13-like ubiquitin C-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03083 Polycomb repressive complex 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
gma03083 Polycomb repressive complex 4
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 4
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly03420 Nucleotide excision repair 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 5
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03040 Spliceosome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 4
zma04144 Endocytosis 3
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
bra03083 Polycomb repressive complex 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03083 Polycomb repressive complex 2
vvi03040 Spliceosome 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03015 mRNA surveillance pathway 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 9
tae04142 Lysosome 8
tae05100 Bacterial invasion of epithelial cells 6
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae04141 Protein processing in endoplasmic reticulum 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna04144 Endocytosis 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03083 Polycomb repressive complex 2
sbi03015 mRNA surveillance pathway 2
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03083 Polycomb repressive complex 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04144 Endocytosis 3
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03083 Polycomb repressive complex 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830548 820364 100800328 100810922 101248777 101266987 4324616 9270404 100381748 100383306 103845922 103855679 100244518 100266796 7491593 7469919 11443023 11432874 123110922 123052820 123444525 123395413 107899198 121214020 106426392 106452507 5725633 8071953 8063275 102602101 102598288 102619247 102619605 100834129 100831891 107804674 107760390
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