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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102598572   long chain base biosynthesis protein 1-like 
 sot-r.1   102597761   long chain base biosynthesis protein 1-like 
 sly-u.5   101244511   long chain base biosynthesis protein 1-like 
 sly-u.5   101248352   long chain base biosynthesis protein 1 
 nta-r.1   107801073   long chain base biosynthesis protein 1 
 nta-r.1   107798499   long chain base biosynthesis protein 1 
 nta-r.1   107795207   long chain base biosynthesis protein 1 
 ath-u.5   LCB1   long-chain base1 
 gma-u.5   100785505   long chain base biosynthesis protein 1 
 gma-u.5   100809783   long chain base biosynthesis protein 1 
 bra-r.6   LCB1   long chain base biosynthesis protein 1 
 bra-r.6   103868026   long chain base biosynthesis protein 1 
 vvi-u.5   100254626   long chain base biosynthesis protein 1 
 ppo-u.5   18105569   long chain base biosynthesis protein 1 
 ppo-u.5   7485168   long chain base biosynthesis protein 1 
 mtr-u.5   25489027   long chain base biosynthesis protein 1 
 mtr-u.5   11407105   long chain base biosynthesis protein 1 
 mtr-u.5   11419184   long chain base biosynthesis protein 1 
 ghi-r.1   107896900   long chain base biosynthesis protein 1 
 ghi-r.1   107925288   long chain base biosynthesis protein 1 
 ghi-r.1   107930291   long chain base biosynthesis protein 1 
 bna-r.1   106451964   long chain base biosynthesis protein 1 
 bna-r.1   106443566   long chain base biosynthesis protein 1-like 
 bna-r.1   106411026   long chain base biosynthesis protein 1 
 cit-r.1   102615172   long chain base biosynthesis protein 1 
 osa-u.5   4348231   long chain base biosynthesis protein 1c-like 
 osa-u.5   4332274   long chain base biosynthesis protein 1a-like 
 osa-u.5   4331075   long chain base biosynthesis protein 1b-like 
 zma-u.5   100281549   serine palmitoyltransferase 1 
 zma-u.5   103633646   long chain base biosynthesis protein 1a-like 
 tae-r.2   123092743   long chain base biosynthesis protein 1a 
 tae-r.2   123098037   long chain base biosynthesis protein 1a 
 tae-r.2   123085297   long chain base biosynthesis protein 1a 
 hvu-r.1   123449140   long chain base biosynthesis protein 1a 
 sbi-r.1   8054332   long chain base biosynthesis protein 1a 
 bdi-r.1   100835046   long chain base biosynthesis protein 1a 
 cre-r.1   CHLRE_03g146507v5   uncharacterized protein 

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Top 50 coexpressed genes to 102598572 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102598572 (sot-r.1 coexpression data)

CoexMap"102598572"


sotLOC102598572 | Entrez gene ID : 102598572      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 1 2 2 1 2 3 3 3 1 3 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00600 [list] [network] Sphingolipid metabolism (35 genes)
sot04382 [list] [network] Cornified envelope formation (35 genes)
GO BP
GO:0046512 [list] [network] sphingosine biosynthetic process  (7 genes)  IEA  
GO:0046513 [list] [network] ceramide biosynthetic process  (14 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (475 genes)  IEA  
GO MF
GO:0004758 [list] [network] serine C-palmitoyltransferase activity  (4 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (119 genes)  IEA  
Protein XP_006361370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_006361370.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006361370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102598572
sot-r.1
for
102597761
sly-u.5
for
101244511
sly-u.5
for
101248352
nta-r.1
for
107801073
nta-r.1
for
107798499
nta-r.1
for
107795207
ath-u.5
for
LCB1
gma-u.5
for
100785505
gma-u.5
for
100809783
bra-r.6
for
LCB1
bra-r.6
for
103868026
vvi-u.5
for
100254626
ppo-u.5
for
18105569
ppo-u.5
for
7485168
mtr-u.5
for
25489027
mtr-u.5
for
11407105
mtr-u.5
for
11419184
ghi-r.1
for
107896900
ghi-r.1
for
107925288
ghi-r.1
for
107930291
bna-r.1
for
106451964
bna-r.1
for
106443566
bna-r.1
for
106411026
cit-r.1
for
102615172
osa-u.5
for
4348231
osa-u.5
for
4332274
osa-u.5
for
4331075
zma-u.5
for
100281549
zma-u.5
for
103633646
tae-r.2
for
123092743
tae-r.2
for
123098037
tae-r.2
for
123085297
hvu-r.1
for
123449140
sbi-r.1
for
8054332
bdi-r.1
for
100835046
cre-r.1
for
CHLRE_03g146507v5


Ortholog ID: 5158
Species sot sot sly sly nta nta nta ath gma gma bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit osa osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102598572 LOC102597761 LOC101244511 LOC101248352 LOC107798499 LOC107795207 LOC107822881 LCB1 LOC100785505 LOC100809783 LCB1 LOC103868026 LOC100254626 LOC18105569 LOC7485168 LOC25489027 LOC11407105 LOC11419184 LOC107896900 LOC107925288 LOC107930291 LOC106451964 LOC106443566 LOC106411026 LOC102615172 LOC4348231 LOC4332274 LOC4331075 LOC100281549 LOC103633646 LOC123092743 LOC123098037 LOC123085297 LOC123449140 LOC8054332 LOC100835046 CHLRE_03g146507v5
Function* long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1-like long-chain base1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1c-like long chain base biosynthesis protein 1a-like long chain base biosynthesis protein 1b-like serine palmitoyltransferase 1 long chain base biosynthesis protein 1a-like long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
sot00564 Glycerophospholipid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04382 Cornified envelope formation 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 4
gma04382 Cornified envelope formation 4
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 4
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04382 Cornified envelope formation 3
bra03015 mRNA surveillance pathway 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00600 Sphingolipid metabolism 3
ppo04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 8
bna03015 mRNA surveillance pathway 5
bna00600 Sphingolipid metabolism 3
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 9
bna03015 mRNA surveillance pathway 6
bna00600 Sphingolipid metabolism 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 9
bna03015 mRNA surveillance pathway 6
bna00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00600 Sphingolipid metabolism 4
osa04382 Cornified envelope formation 3
osa00061 Fatty acid biosynthesis 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 3
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 8
zma04382 Cornified envelope formation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04382 Cornified envelope formation 9
zma00600 Sphingolipid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 6
tae04382 Cornified envelope formation 6
tae04626 Plant-pathogen interaction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 6
tae04382 Cornified envelope formation 6
tae04626 Plant-pathogen interaction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04382 Cornified envelope formation 2
sbi04148 Efferocytosis 2
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
cre00562 Inositol phosphate metabolism 2
cre04144 Endocytosis 2
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102598572 102597761 101244511 101248352 107798499 107795207 107822881 829800 100785505 100809783 103862472 103868026 100254626 18105569 7485168 25489027 11407105 11419184 107896900 107925288 107930291 106451964 106443566 106411026 102615172 4348231 4332274 4331075 100281549 103633646 123092743 123098037 123085297 123449140 8054332 100835046 5721216
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