ATTED-II : GeneCoexpression result

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Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102598682	sodium-dependent phosphate transport protein 1, chloroplastic
sly-u.5	101263257	ascorbate transporter, chloroplastic
sly-u.5	101266861	sodium-dependent phosphate transport protein 1, chloroplastic
ath-u.5	PHT4;1	phosphate transporter 4;1
ath-u.5	ANTR2	Major facilitator superfamily protein
gma-u.5	100793618	ascorbate transporter, chloroplastic
gma-u.5	100792104	sodium-dependent phosphate transport protein 1, chloroplastic
gma-u.5	100787020	sodium-dependent phosphate transport protein 1, chloroplastic
vvi-u.5	100246658	sodium-dependent phosphate transport protein 1, chloroplastic
vvi-u.5	100255061	ascorbate transporter, chloroplastic
ppo-u.5	7478542	probable anion transporter 1, chloroplastic
ppo-u.5	7481487	sodium-dependent phosphate transport protein 1, chloroplastic
ppo-u.5	7496975	ascorbate transporter, chloroplastic
mtr-u.5	11430128	ascorbate transporter, chloroplastic
mtr-u.5	11443407	ascorbate transporter, chloroplastic
mtr-u.5	25490824	sodium-dependent phosphate transport protein 1, chloroplastic
osa-u.5	PHT4;1	probable anion transporter 1, chloroplastic
osa-u.5	PHT4;4	probable anion transporter 4, chloroplastic
zma-u.5	100191676	uncharacterized LOC100191676
zma-u.5	100281620	sialin
zma-u.5	103635996	probable anion transporter 4, chloroplastic

Top 50 coexpressed genes to 102598682 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102598682 (sot-r.1 coexpression data)

CoexMap"102598682"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(960 genes)

IEA

GO CC

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1159 genes)

IEA

Protein

XP_006361301.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 3, nucl_plas 3, golg_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3

(predict for XP_006361301.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_006361301.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102598682 .	sly-u.5 for 101263257 .	sly-u.5 for 101266861 .	ath-u.5 for PHT4;1 .	ath-u.5 for ANTR2 .	gma-u.5 for 100793618 .	gma-u.5 for 100792104 .	gma-u.5 for 100787020 .	vvi-u.5 for 100246658 .	vvi-u.5 for 100255061 .	ppo-u.5 for 7478542 .	ppo-u.5 for 7481487 .	ppo-u.5 for 7496975 .	mtr-u.5 for 11430128 .	mtr-u.5 for 11443407 .	mtr-u.5 for 25490824 .	osa-u.5 for PHT4;1 .	osa-u.5 for PHT4;4 .	zma-u.5 for 100191676 .	zma-u.5 for 100281620 .	zma-u.5 for 103635996 .

Ortholog

Ortholog ID: 2453

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

ANTR2

PHT4;1

PHT4;4

PHT4;1

Function^*

Major facilitator superfamily protein

phosphate transporter 4;1

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

sialin

probable anion transporter 4, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

uncharacterized protein

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

ascorbate transporter, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

sodium-dependent phosphate transport protein 1, chloroplastic-like

ascorbate transporter, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00620	Pyruvate metabolism	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00196	Photosynthesis - antenna proteins	8
ppo00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	4
mtr00500	Starch and sucrose metabolism	3
mtr01200	Carbon metabolism	3
mtr01240	Biosynthesis of cofactors	2
mtr00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3
tae00196	Photosynthesis - antenna proteins	2
tae04016	MAPK signaling pathway - plant	2
tae04070	Phosphatidylinositol signaling system	2
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	2
bna04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	3
bdi00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	3
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00760	Nicotinate and nicotinamide metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

827908

817515

100784401

100793618

101263257

101266861

4347913

4326905

100281620

103635996

103868018

103858874

100255061

100246658

7478542

7496975

25490824

11443407

123095567

123069715

123446803

123443601

107887452

107952772

106384139

106434099

5719884

8078115

8075480

102598682

102599205

102630913

102613898

100842035

100832197

107790630

107787093

The preparation time of this page was 0.1 [sec].


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	tae	hvu	ghi	bdi	cit	bra	cre	sbi	bna	nta
Paralog	1	2	2	3	2	3	3	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102598682 (sot-r.1 coexpression data)

Top 50 enrichment test to 102598682 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**