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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599300   psbP domain-containing protein 4, chloroplastic 
 sly-u.5   101259835   psbP domain-containing protein 4, chloroplastic 
 nta-r.1   107770985   psbP domain-containing protein 4, chloroplastic 
 nta-r.1   107787263   psbP domain-containing protein 4, chloroplastic-like 
 ath-u.5   AT1G77090   thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 
 gma-u.5   100800838   psbP domain-containing protein 4, chloroplastic 
 gma-u.5   100785447   psbP domain-containing protein 4, chloroplastic 
 bra-r.6   103832161   psbP domain-containing protein 4, chloroplastic 
 vvi-u.5   100252244   psbP domain-containing protein 4, chloroplastic 
 ppo-u.5   7466419   psbP domain-containing protein 4, chloroplastic 
 mtr-u.5   11418122   psbP domain-containing protein 4, chloroplastic 
 ghi-r.1   107952020   psbP domain-containing protein 4, chloroplastic 
 ghi-r.1   107910422   psbP domain-containing protein 4, chloroplastic 
 bna-r.1   106440718   psbP domain-containing protein 4, chloroplastic 
 bna-r.1   106377232   psbP domain-containing protein 4, chloroplastic-like 
 bna-r.1   106354631   psbP domain-containing protein 4, chloroplastic 
 cit-r.1   102614526   psbP domain-containing protein 4, chloroplastic 
 osa-u.5   4351700   psbP domain-containing protein 4, chloroplastic 
 zma-u.5   100282037   uncharacterized LOC100282037 
 tae-r.2   123189673   psbP domain-containing protein 4, chloroplastic 
 tae-r.2   123053781   psbP domain-containing protein 4, chloroplastic 
 tae-r.2   123045916   psbP domain-containing protein 4, chloroplastic 
 hvu-r.1   123427132   psbP domain-containing protein 4, chloroplastic 
 sbi-r.1   8082785   psbP domain-containing protein 4, chloroplastic 
 bdi-r.1   100842804   psbP domain-containing protein 4, chloroplastic 
 cre-r.1   CHLRE_03g198950v5   photosystem II thylakoid lumenal 29.8 kDa protein PsbP 

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Top 50 coexpressed genes to 102599300 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102599300 (sot-r.1 coexpression data)

CoexMap"102599300"


sotLOC102599300 | Entrez gene ID : 102599300    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 1 1 1 1 2 3 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (24 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (31 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (256 genes)  IEA  
Protein XP_006356302.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  vacu 1  (predict for XP_006356302.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006356302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599300
sly-u.5
for
101259835
nta-r.1
for
107770985
nta-r.1
for
107787263
ath-u.5
for
AT1G77090
gma-u.5
for
100800838
gma-u.5
for
100785447
bra-r.6
for
103832161
vvi-u.5
for
100252244
ppo-u.5
for
7466419
mtr-u.5
for
11418122
ghi-r.1
for
107952020
ghi-r.1
for
107910422
bna-r.1
for
106440718
bna-r.1
for
106377232
bna-r.1
for
106354631
cit-r.1
for
102614526
osa-u.5
for
4351700
zma-u.5
for
100282037
tae-r.2
for
123189673
tae-r.2
for
123053781
tae-r.2
for
123045916
hvu-r.1
for
123427132
sbi-r.1
for
8082785
bdi-r.1
for
100842804
cre-r.1
for
CHLRE_03g198950v5


Ortholog ID: 9297
Species sot sly nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102599300 LOC101259835 LOC107770985 LOC107787263 AT1G77090 LOC100800838 LOC100785447 LOC103832161 LOC100252244 LOC7466419 LOC11418122 LOC107952020 LOC107910422 LOC106440718 LOC106377232 LOC125589168 LOC102614526 LOC4351700 LOC100282037 LOC123189673 LOC123053781 LOC123045916 LOC123427132 LOC8082785 LOC100842804 CHLRE_03g198950v5
Function* psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic-like thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic-like psbP domain-containing protein 4, chloroplastic-like psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic uncharacterized LOC100282037 psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic photosystem II thylakoid lumenal 29.8 kDa protein PsbP
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 3
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102599300 101259835 107770985 107787263 844043 100800838 100785447 103832161 100252244 7466419 11418122 107952020 107910422 106440718 106377232 125589168 102614526 4351700 100282037 123189673 123053781 123045916 123427132 8082785 100842804 5718966
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