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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600715   protein TSS 
 sly-u.5   101261719   protein REDUCED CHLOROPLAST COVERAGE 3 
 nta-r.1   107816753   protein REDUCED CHLOROPLAST COVERAGE 3 
 nta-r.1   107786647   protein REDUCED CHLOROPLAST COVERAGE 3 
 nta-r.1   142171576   uncharacterized LOC142171576 
 ath-u.5   AT1G15290   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100784276   protein TSS 
 gma-u.5   100801625   protein TSS 
 bra-r.6   103872320   protein TSS 
 vvi-u.5   100254354   protein REDUCED CHLOROPLAST COVERAGE 3 
 ppo-u.5   18096693   protein REDUCED CHLOROPLAST COVERAGE 3 
 mtr-u.5   11433937   protein TSS 
 ghi-r.1   107962950   protein TSS 
 ghi-r.1   121230807   protein TSS 
 ghi-r.1   121218638   protein TSS 
 bna-r.1   106346672   protein REDUCED CHLOROPLAST COVERAGE 3 
 bna-r.1   106452142   protein REDUCED CHLOROPLAST COVERAGE 3 
 cit-r.1   127903677   protein REDUCED CHLOROPLAST COVERAGE 3-like 
 osa-u.5   4337192   protein REDUCED CHLOROPLAST COVERAGE 3 
 zma-u.5   103645852   protein TSS 
 zma-u.5   103642120   protein TSS 
 tae-r.2   123190799   protein TSS 
 tae-r.2   123054946   protein TSS 
 tae-r.2   123047136   protein TSS 
 hvu-r.1   123428166   protein TSS-like 
 sbi-r.1   8068477   protein TSS 
 bdi-r.1   100830075   protein TSS 

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Top 50 coexpressed genes to 102600715 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600715 (sot-r.1 coexpression data)

CoexMap"102600715"


sotLOC102600715 | Entrez gene ID : 102600715    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 3 1 2 1 1 1 1 3 2 1 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (772 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006356227.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 1,  cysk 1,  cyto_nucl 1  (predict for XP_006356227.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006356227.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600715
sly-u.5
for
101261719
nta-r.1
for
107816753
nta-r.1
for
107786647
nta-r.1
for
142171576
ath-u.5
for
AT1G15290
gma-u.5
for
100784276
gma-u.5
for
100801625
bra-r.6
for
103872320
vvi-u.5
for
100254354
ppo-u.5
for
18096693
mtr-u.5
for
11433937
ghi-r.1
for
107962950
ghi-r.1
for
121230807
ghi-r.1
for
121218638
bna-r.1
for
106346672
bna-r.1
for
106452142
cit-r.1
for
127903677
osa-u.5
for
4337192
zma-u.5
for
103645852
zma-u.5
for
103642120
tae-r.2
for
123190799
tae-r.2
for
123054946
tae-r.2
for
123047136
hvu-r.1
for
123428166
sbi-r.1
for
8068477
bdi-r.1
for
100830075


Ortholog ID: 7035
Species sot sly nta nta nta ath gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit osa zma zma tae tae tae hvu sbi bdi
Symbol LOC102600715 LOC101261719 LOC107816753 LOC107786647 LOC142171576 AT1G15290 LOC100784276 LOC100801625 LOC103872320 LOC100254354 LOC18096693 LOC11433937 LOC107962950 LOC121230807 LOC121218638 LOC106346672 LOC106452142 LOC112495972 LOC4337192 LOC103645852 LOC103642120 LOC123190799 LOC123054946 LOC123047136 LOC123428166 LOC8068477 LOC100830075
Function* protein TSS protein REDUCED CHLOROPLAST COVERAGE 3 protein REDUCED CHLOROPLAST COVERAGE 3 protein REDUCED CHLOROPLAST COVERAGE 3 uncharacterized LOC142171576 Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 3 protein REDUCED CHLOROPLAST COVERAGE 3 protein TSS protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 3 protein REDUCED CHLOROPLAST COVERAGE 3 protein REDUCED CHLOROPLAST COVERAGE 3-like protein REDUCED CHLOROPLAST COVERAGE 3 protein TSS protein TSS protein TSS protein TSS protein TSS protein TSS-like protein TSS protein TSS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 3
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 5
nta01240 Biosynthesis of cofactors 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00270 Cysteine and methionine metabolism 3
bra00920 Sulfur metabolism 2
bra01200 Carbon metabolism 2
bra01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00900 Terpenoid backbone biosynthesis 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 3
mtr01230 Biosynthesis of amino acids 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi00270 Cysteine and methionine metabolism 3
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00052 Galactose metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00052 Galactose metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600715 101261719 107816753 107786647 142171576 838097 100784276 100801625 103872320 100254354 18096693 11433937 107962950 121230807 121218638 106346672 106452142 112495972 4337192 103645852 103642120 123190799 123054946 123047136 123428166 8068477 100830075
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