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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602673   psbP domain-containing protein 3, chloroplastic-like 
 sly-u.5   101247415   psbP domain-containing protein 3, chloroplastic 
 ath-u.5   AT1G76450   Photosystem II reaction center PsbP family protein 
 gma-u.5   100805637   psbP domain-containing protein 3, chloroplastic 
 gma-u.5   100785276   psbP domain-containing protein 3, chloroplastic 
 vvi-u.5   100263326   psbP domain-containing protein 3, chloroplastic 
 ppo-u.5   7494726   psbP domain-containing protein 3, chloroplastic 
 mtr-u.5   11418216   psbP domain-containing protein 3, chloroplastic 
 osa-u.5   4346015   psbP domain-containing protein 3, chloroplastic 
 zma-u.5   103648413   psbP domain-containing protein 3, chloroplastic 
 zma-u.5   100281340   uncharacterized LOC100281340 
 zma-u.5   103649280   psbP domain-containing protein 3, chloroplastic 

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Top 50 coexpressed genes to 102602673 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602673 (sot-r.1 coexpression data)

CoexMap"102602673"


sotLOC102602673 | Entrez gene ID : 102602673      
Species sot sly ath gma vvi ppo mtr osa zma tae hvu ghi bdi cit bra cre sbi bna nta
Paralog 1 1 1 2 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (24 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (31 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (256 genes)  IEA  
Protein XP_006342526.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_006342526.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006342526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602673

.
sly-u.5
for
101247415

.
ath-u.5
for
AT1G76450

.
gma-u.5
for
100805637

.
gma-u.5
for
100785276

.
vvi-u.5
for
100263326

.
ppo-u.5
for
7494726

.
mtr-u.5
for
11418216

.
osa-u.5
for
4346015

.
zma-u.5
for
103648413

.
zma-u.5
for
100281340

.
zma-u.5
for
103649280

.


Ortholog ID: 11137
Species ath gma gma sly osa zma zma bra vvi ppo mtr hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G76450 LOC100805637 LOC100785276 LOC101247415 LOC4346015 LOC103649280 LOC103648413 LOC103832108 LOC100263326 LOC7494726 LOC11418216 LOC123408797 LOC121213982 LOC107922286 LOC111207198 LOC106421668 CHLRE_10g446350v5 LOC8055163 LOC102602673 LOC102607932 LOC100840022 LOC107786300 LOC107793066
Function* Photosystem II reaction center PsbP family protein psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic uncharacterized protein psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic-like psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic psbP domain-containing protein 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra03010 Ribosome 3
bra00030 Pentose phosphate pathway 2
bra00040 Pentose and glucuronate interconversions 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 3
cre01230 Biosynthesis of amino acids 3
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta03060 Protein export 2
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843978 100805637 100785276 101247415 4346015 103649280 103648413 103832108 100263326 7494726 11418216 123408797 121213982 107922286 111207198 106421668 5723845 8055163 102602673 102607932 100840022 107786300 107793066
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