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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602939   aminomethyltransferase, mitochondrial-like 
 sly-u.5   101249137   aminomethyltransferase, mitochondrial 
 nta-r.1   107805971   aminomethyltransferase, mitochondrial 
 nta-r.1   107783755   aminomethyltransferase, mitochondrial 
 ath-u.5   AT1G11860   Glycine cleavage T-protein family 
 gma-u.5   100800509   aminomethyltransferase, mitochondrial 
 gma-u.5   100804288   aminomethyltransferase, mitochondrial 
 gma-u.5   100809241   aminomethyltransferase, mitochondrial 
 bra-r.6   103836204   aminomethyltransferase, mitochondrial 
 bra-r.6   103843220   aminomethyltransferase, mitochondrial 
 vvi-u.5   100250401   aminomethyltransferase, mitochondrial 
 ppo-u.5   18111215   aminomethyltransferase, mitochondrial 
 ppo-u.5   18097363   aminomethyltransferase, mitochondrial 
 mtr-u.5   11437303   aminomethyltransferase, mitochondrial 
 ghi-r.1   107905916   aminomethyltransferase, mitochondrial 
 ghi-r.1   107962001   aminomethyltransferase, mitochondrial 
 ghi-r.1   107958283   aminomethyltransferase, mitochondrial 
 bna-r.1   106362172   aminomethyltransferase, mitochondrial 
 bna-r.1   106415143   aminomethyltransferase, mitochondrial 
 bna-r.1   106413869   aminomethyltransferase, mitochondrial 
 cit-r.1   102624724   aminomethyltransferase, mitochondrial 
 osa-u.5   4337051   aminomethyltransferase, mitochondrial 
 zma-u.5   100279332   uncharacterized LOC100279332 
 tae-r.2   123190483   aminomethyltransferase, mitochondrial 
 tae-r.2   123054633   aminomethyltransferase, mitochondrial 
 tae-r.2   123046778   aminomethyltransferase, mitochondrial 
 hvu-r.1   123427785   aminomethyltransferase, mitochondrial 
 sbi-r.1   8066805   aminomethyltransferase, mitochondrial 
 bdi-r.1   100824957   aminomethyltransferase, mitochondrial 
 cre-r.1   CHLRE_03g193750v5   uncharacterized protein 

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Top 50 coexpressed genes to 102602939 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602939 (sot-r.1 coexpression data)

CoexMap"102602939"


sotLOC102602939 | Entrez gene ID : 102602939    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 3 2 1 2 1 3 3 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00260 [list] [network] Glycine, serine and threonine metabolism (73 genes)
sot00630 [list] [network] Glyoxylate and dicarboxylate metabolism (83 genes)
sot00670 [list] [network] One carbon pool by folate (37 genes)
sot00785 [list] [network] Lipoic acid metabolism (40 genes)
sot01200 [list] [network] Carbon metabolism (293 genes)
GO BP
GO:0006546 [list] [network] glycine catabolic process  (5 genes)  IEA  
GO CC
GO:0005960 [list] [network] glycine cleavage complex  (5 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (603 genes)  IEA  
GO MF
GO:0004047 [list] [network] aminomethyltransferase activity  (1 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein NP_001275291.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  pero 3,  chlo_mito 3  (predict for NP_001275291.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001275291.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602939
sly-u.5
for
101249137
nta-r.1
for
107805971
nta-r.1
for
107783755
ath-u.5
for
AT1G11860
gma-u.5
for
100800509
gma-u.5
for
100804288
gma-u.5
for
100809241
bra-r.6
for
103836204
bra-r.6
for
103843220
vvi-u.5
for
100250401
ppo-u.5
for
18111215
ppo-u.5
for
18097363
mtr-u.5
for
11437303
ghi-r.1
for
107905916
ghi-r.1
for
107962001
ghi-r.1
for
107958283
bna-r.1
for
106362172
bna-r.1
for
106415143
bna-r.1
for
106413869
cit-r.1
for
102624724
osa-u.5
for
4337051
zma-u.5
for
100279332
tae-r.2
for
123190483
tae-r.2
for
123054633
tae-r.2
for
123046778
hvu-r.1
for
123427785
sbi-r.1
for
8066805
bdi-r.1
for
100824957
cre-r.1
for
CHLRE_03g193750v5


Ortholog ID: 6697
Species sot sly nta nta ath gma gma gma bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102602939 LOC101249137 LOC107805971 LOC107783755 AT1G11860 LOC100804288 LOC100809241 LOC100778188 LOC103836204 LOC103843220 LOC100250401 LOC18111215 LOC18097363 LOC11437303 LOC107905916 LOC107962001 LOC107958283 LOC106362172 LOC106415143 LOC106413869 LOC102624724 LOC4337051 LOC100279332 LOC123190483 LOC123054633 LOC123046778 LOC123427785 LOC8066805 LOC100824957 CHLRE_03g193750v5
Function* aminomethyltransferase, mitochondrial-like aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial Glycine cleavage T-protein family aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial uncharacterized LOC100279332 aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial aminomethyltransferase, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 9
sot00710 Carbon fixation by Calvin cycle 8
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 3
sot00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 7
sly01200 Carbon metabolism 7
sly00260 Glycine, serine and threonine metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 12
nta01200 Carbon metabolism 10
nta00260 Glycine, serine and threonine metabolism 8
nta00710 Carbon fixation by Calvin cycle 6
nta00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 12
nta01200 Carbon metabolism 10
nta00260 Glycine, serine and threonine metabolism 8
nta00710 Carbon fixation by Calvin cycle 6
nta00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00260 Glycine, serine and threonine metabolism 5
ath00670 One carbon pool by folate 5
ath00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 4
gma00630 Glyoxylate and dicarboxylate metabolism 4
gma00670 One carbon pool by folate 4
gma00785 Lipoic acid metabolism 4
gma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma00670 One carbon pool by folate 3
gma00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00910 Nitrogen metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 9
bra01230 Biosynthesis of amino acids 7
bra00630 Glyoxylate and dicarboxylate metabolism 6
bra00010 Glycolysis / Gluconeogenesis 5
bra00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra01230 Biosynthesis of amino acids 6
bra00630 Glyoxylate and dicarboxylate metabolism 5
bra00785 Lipoic acid metabolism 4
bra00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00710 Carbon fixation by Calvin cycle 4
vvi00195 Photosynthesis 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 10
ppo00710 Carbon fixation by Calvin cycle 8
ppo01230 Biosynthesis of amino acids 7
ppo00030 Pentose phosphate pathway 4
ppo00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 10
ppo01230 Biosynthesis of amino acids 8
ppo00270 Cysteine and methionine metabolism 7
ppo01200 Carbon metabolism 6
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00630 Glyoxylate and dicarboxylate metabolism 4
mtr00710 Carbon fixation by Calvin cycle 3
mtr01230 Biosynthesis of amino acids 3
mtr00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit01230 Biosynthesis of amino acids 3
cit03010 Ribosome 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 8
osa00630 Glyoxylate and dicarboxylate metabolism 6
osa01230 Biosynthesis of amino acids 5
osa00260 Glycine, serine and threonine metabolism 5
osa00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 7
zma01200 Carbon metabolism 7
zma00630 Glyoxylate and dicarboxylate metabolism 5
zma00710 Carbon fixation by Calvin cycle 4
zma00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae00260 Glycine, serine and threonine metabolism 4
tae00670 One carbon pool by folate 4
tae00785 Lipoic acid metabolism 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 7
tae00260 Glycine, serine and threonine metabolism 4
tae00670 One carbon pool by folate 4
tae00785 Lipoic acid metabolism 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 10
hvu00710 Carbon fixation by Calvin cycle 6
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00195 Photosynthesis 3
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi01230 Biosynthesis of amino acids 5
sbi00030 Pentose phosphate pathway 4
sbi00710 Carbon fixation by Calvin cycle 3
sbi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 3
bdi00190 Oxidative phosphorylation 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 5
cre00630 Glyoxylate and dicarboxylate metabolism 5
cre01200 Carbon metabolism 5
cre00670 One carbon pool by folate 3
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602939 101249137 107805971 107783755 837733 100804288 100809241 100778188 103836204 103843220 100250401 18111215 18097363 11437303 107905916 107962001 107958283 106362172 106415143 106413869 102624724 4337051 100279332 123190483 123054633 123046778 123427785 8066805 100824957 5718707
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