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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102604045   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 sly-u.5   101268295   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 nta-r.1   107772419   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 nta-r.1   107825612   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 ath-u.5   AT-HF   HIS HF 
 gma-u.5   100815533   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 gma-u.5   100500353   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 bra-r.6   103863841   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 vvi-u.5   100262276   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 ppo-u.5   7482280   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 ppo-u.5   7463852   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 mtr-u.5   25488966   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 ghi-r.1   107911782   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 ghi-r.1   107924335   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 bna-r.1   106426580   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 bna-r.1   106445482   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 bna-r.1   106445959   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 cit-r.1   102621956   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 osa-u.5   4332296   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 zma-u.5   100501537   uncharacterized LOC100501537 
 tae-r.2   123098015   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 tae-r.2   123092717   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 tae-r.2   123085324   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 hvu-r.1   123449115   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 sbi-r.1   8054317   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 bdi-r.1   100830050   imidazole glycerol phosphate synthase hisHF, chloroplastic 
 cre-r.1   CHLRE_11g481500v5   uncharacterized protein 

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Top 50 coexpressed genes to 102604045 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102604045 (sot-r.1 coexpression data)

CoexMap"102604045"


sotLOC102604045 | Entrez gene ID : 102604045      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 1 1 2 1 2 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00340 [list] [network] Histidine metabolism (19 genes)
sot01230 [list] [network] Biosynthesis of amino acids (235 genes)
GO BP
GO:0000105 [list] [network] L-histidine biosynthetic process  (9 genes)  IEA  
GO CC
GO MF
GO:0000107 [list] [network] imidazoleglycerol-phosphate synthase activity  (1 genes)  IEA  
GO:0004359 [list] [network] glutaminase activity  (3 genes)  IEA  
Protein XP_006346198.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_006346198.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006346198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102604045
sly-u.5
for
101268295
nta-r.1
for
107772419
nta-r.1
for
107825612
ath-u.5
for
AT-HF
gma-u.5
for
100815533
gma-u.5
for
100500353
bra-r.6
for
103863841
vvi-u.5
for
100262276
ppo-u.5
for
7482280
ppo-u.5
for
7463852
mtr-u.5
for
25488966
ghi-r.1
for
107911782
ghi-r.1
for
107924335
bna-r.1
for
106426580
bna-r.1
for
106445482
bna-r.1
for
106445959
cit-r.1
for
102621956
osa-u.5
for
4332296
zma-u.5
for
100501537
tae-r.2
for
123098015
tae-r.2
for
123092717
tae-r.2
for
123085324
hvu-r.1
for
123449115
sbi-r.1
for
8054317
bdi-r.1
for
100830050
cre-r.1
for
CHLRE_11g481500v5


Ortholog ID: 8559
Species sot sly nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102604045 LOC101268295 LOC107772419 LOC107825612 AT-HF LOC100815533 LOC100500353 LOC103863841 LOC100262276 LOC7482280 LOC7463852 LOC25488966 LOC107911782 LOC107924335 LOC106426580 LOC106445482 LOC106445959 LOC102621956 LOC4332296 LOC100501537 LOC123098015 LOC123092717 LOC123085324 LOC123449115 LOC8054317 LOC100830050 CHLRE_11g481500v5
Function* imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic HIS HF imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic uncharacterized LOC100501537 imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic imidazole glycerol phosphate synthase hisHF, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
sot03010 Ribosome 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00230 Purine metabolism 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly03018 RNA degradation 2
sly00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03040 Spliceosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 14
ath00290 Valine, leucine and isoleucine biosynthesis 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath00300 Lysine biosynthesis 4
ath00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma00290 Valine, leucine and isoleucine biosynthesis 3
gma01210 2-Oxocarboxylic acid metabolism 3
gma00340 Histidine metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 7
gma00340 Histidine metabolism 2
gma03010 Ribosome 2
gma00261 Monobactam biosynthesis 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00970 Aminoacyl-tRNA biosynthesis 3
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi04141 Protein processing in endoplasmic reticulum 4
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03010 Ribosome 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 3
bna01230 Biosynthesis of amino acids 3
bna00260 Glycine, serine and threonine metabolism 3
bna00670 One carbon pool by folate 3
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03015 mRNA surveillance pathway 2
bna00260 Glycine, serine and threonine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 3
bna01230 Biosynthesis of amino acids 3
bna00260 Glycine, serine and threonine metabolism 3
bna00670 One carbon pool by folate 3
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00340 Histidine metabolism 2
osa03010 Ribosome 2
osa00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma00970 Aminoacyl-tRNA biosynthesis 4
zma00340 Histidine metabolism 3
zma00450 Selenocompound metabolism 2
zma00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 14
tae00220 Arginine biosynthesis 11
tae00340 Histidine metabolism 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00250 Alanine, aspartate and glutamate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00220 Arginine biosynthesis 8
tae00340 Histidine metabolism 6
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00220 Arginine biosynthesis 8
tae00340 Histidine metabolism 6
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 5
hvu00010 Glycolysis / Gluconeogenesis 5
hvu01200 Carbon metabolism 5
hvu00620 Pyruvate metabolism 4
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi03010 Ribosome 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cre00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102604045 101268295 107772419 107825612 828797 100815533 100500353 103863841 100262276 7482280 7463852 25488966 107911782 107924335 106426580 106445482 106445959 102621956 4332296 100501537 123098015 123092717 123085324 123449115 8054317 100830050 5722944
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