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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102604824   peptide chain release factor PrfB2, chloroplastic 
 sly-u.5   101247467   peptide chain release factor PrfB2, chloroplastic 
 ath-u.5   AT1G56350   Peptide chain release factor 2 
 gma-u.5   100797427   peptide chain release factor PrfB2, chloroplastic 
 vvi-u.5   100244239   peptide chain release factor PrfB2, chloroplastic 
 ppo-u.5   7481699   peptide chain release factor PrfB2, chloroplastic 
 mtr-u.5   25499654   peptide chain release factor PrfB2, chloroplastic 
 osa-u.5   4332598   peptide chain release factor PrfB2, chloroplastic 
 zma-u.5   100281737   peptide chain release factor 2 

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Top 50 coexpressed genes to 102604824 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102604824 (sot-r.1 coexpression data)

CoexMap"102604824"


sotLOC102604824 | Entrez gene ID : 102604824      
Species sot sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006415 [list] [network] translational termination  (12 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0016149 [list] [network] translation release factor activity, codon specific  (4 genes)  IEA  
Protein XP_006344756.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_006344756.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_006344756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102604824
sly-u.5
for
101247467
ath-u.5
for
AT1G56350
gma-u.5
for
100797427
vvi-u.5
for
100244239
ppo-u.5
for
7481699
mtr-u.5
for
25499654
osa-u.5
for
4332598
zma-u.5
for
100281737


Ortholog ID: 11095
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi bna bna osa zma tae tae hvu sbi sbi bdi
Symbol LOC102604824 LOC101247467 LOC107768426 LOC107821694 AT1G56350 LOC100797427 LOC103849449 LOC100244239 LOC7481699 LOC25499654 LOC107933789 LOC107893920 LOC106346819 LOC106390634 LOC4332598 LOC100281737 LOC123097685 LOC123085659 LOC123448836 LOC8082710 LOC8083995 LOC100835454
Function* peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic Peptide chain release factor 2 peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor 2 peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 7
bna04382 Cornified envelope formation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00510 N-Glycan biosynthesis 3
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae00510 N-Glycan biosynthesis 4
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102604824 101247467 107768426 107821694 842089 100797427 103849449 100244239 7481699 25499654 107933789 107893920 106346819 106390634 4332598 100281737 123097685 123085659 123448836 8082710 8083995 100835454
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