ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102604849	axial regulator YABBY 1
sot-r.1	102577797	protein YABBY 4
sly-u.5	YABBY1b	axial regulator YABBY1b
sly-u.5	YABBY1a	axial regulator YABBY1a
nta-r.1	107811927	axial regulator YABBY 1
nta-r.1	107822998	axial regulator YABBY 1-like
nta-r.1	107798917	protein YABBY 4
ath-u.5	AFO	Plant-specific transcription factor YABBY family protein
gma-u.5	FILA	YABBY protein FILa
gma-u.5	100794423	protein YABBY 5
gma-u.5	100786175	protein YABBY 7
bra-r.6	103830131	axial regulator YABBY 1
bra-r.6	103866196	axial regulator YABBY 1
vvi-u.5	100243667	axial regulator YABBY 1
vvi-u.5	100267708	protein YABBY 4
ppo-u.5	18096332	axial regulator YABBY 1
ppo-u.5	7465527	protein YABBY 4
ppo-u.5	7488885	axial regulator YABBY 1
ghi-r.1	107911592	axial regulator YABBY 1
ghi-r.1	121211138	axial regulator YABBY 1
ghi-r.1	107954568	axial regulator YABBY 1
bna-r.1	106371208	axial regulator YABBY 1-like
cit-r.1	102614498	axial regulator YABBY 1
cit-r.1	102622362	axial regulator YABBY 1-like
osa-u.5	4336518	protein YABBY 5-like
osa-u.5	4330130	protein YABBY 4-like
zma-u.5	100193442	putative YABBY domain transcription factor family protein
zma-u.5	542128	yabby14
zma-u.5	542129	protein YABBY 4
tae-r.2	123144945	protein YABBY 4
tae-r.2	123054031	protein YABBY 5
tae-r.2	123041704	protein YABBY 5
sbi-r.1	8075170	protein YABBY 4
sbi-r.1	8083323	protein YABBY 5
bdi-r.1	100831851	protein YABBY 4
bdi-r.1	100845555	protein YABBY 5

Annotation

functional annotation

KEGG

GO BP

GO:1902183 [list] [network] regulation of shoot apical meristem development	(2 genes)	IEA
GO:2000024 [list] [network] regulation of leaf development	(2 genes)	IEA
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis	(3 genes)	IEA
GO:0010158 [list] [network] abaxial cell fate specification	(11 genes)	IEA
GO:0045165 [list] [network] cell fate commitment	(19 genes)	IEA
GO:0010154 [list] [network] fruit development	(38 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(205 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2556 genes)

IEA

GO MF

Protein

XP_006347890.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1

(predict for XP_006347890.1)

Subcellular
localization
TargetP

other 5

(predict for XP_006347890.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102604849	sot-r.1 for 102577797	sly-u.5 for YABBY1b	sly-u.5 for YABBY1a	nta-r.1 for 107811927	nta-r.1 for 107822998	nta-r.1 for 107798917	ath-u.5 for AFO	gma-u.5 for FILA	gma-u.5 for 100794423	gma-u.5 for 100786175	bra-r.6 for 103830131	bra-r.6 for 103866196	vvi-u.5 for 100243667	vvi-u.5 for 100267708	ppo-u.5 for 18096332	ppo-u.5 for 7465527	ppo-u.5 for 7488885	ghi-r.1 for 107911592	ghi-r.1 for 121211138	ghi-r.1 for 107954568	bna-r.1 for 106371208	cit-r.1 for 102614498	cit-r.1 for 102622362	osa-u.5 for 4336518	osa-u.5 for 4330130	zma-u.5 for 100193442	zma-u.5 for 542128	zma-u.5 for 542129	tae-r.2 for 123144945	tae-r.2 for 123054031	tae-r.2 for 123041704	sbi-r.1 for 8075170	sbi-r.1 for 8083323	bdi-r.1 for 100831851	bdi-r.1 for 100845555

Ortholog

Ortholog ID: 2893

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

ghi

bna

cit

osa

zma

tae

sbi

bdi

Symbol

LOC102604849

LOC102577797

YABBY1b

YABBY1a

LOC107811927

LOC107798917

LOC107802952

AFO

FILA

Function^*

axial regulator YABBY 1

protein YABBY 4

axial regulator YABBY1b

axial regulator YABBY1a

axial regulator YABBY 1

protein YABBY 4

axial regulator YABBY 1

Plant-specific transcription factor YABBY family protein

YABBY protein FILa

protein YABBY 5

protein YABBY 3

axial regulator YABBY 1

protein YABBY 4

axial regulator YABBY 1

axial regulator YABBY 1-like

protein YABBY 5-like

protein YABBY 4-like

putative YABBY domain transcription factor family protein

yabby14

protein YABBY 4

protein YABBY 5

protein YABBY 4

protein YABBY 5

protein YABBY 4

protein YABBY 5

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3

Expression

Expression pattern

Entrez Gene ID^*

102604849

102577797

101247051

101246760

107811927

107798917

107802952

819127

100798441

100794423

100781267

103830131

103866196

100243667

100267708

7465527

7488885

121211138

107934031

107886089

106432121

102614498

102622362

4336518

4330130

100193442

542128

542129

123127847

123137614

123189917

8075170

8083323

100831851

100845555

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102604849 (sot-r.1 coexpression data)

Top 50 enrichment test to 102604849 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	ghi	bna	cit	osa	zma	tae	sbi	bdi	cre	hvu	mtr
Paralog	2	2	3	1	3	2	2	3	3	1	2	2	3	3	2	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102604849 (sot-r.1 coexpression data)

Top 50 enrichment test to 102604849 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**