Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101256653   transcription factor SPEECHLESS 
 nta-r.1   107765572   transcription factor SPEECHLESS-like 
 nta-r.1   107784398   transcription factor SPEECHLESS-like 
 ath-u.5   SPCH   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   SPCH1   transcription factor SPEECHLESS 
 gma-u.5   SPCH2   transcription factor SPEECHLESS-like 
 bra-r.6   103852045   transcription factor SPEECHLESS 
 bra-r.6   103844802   transcription factor SPEECHLESS 
 ghi-r.1   107947261   transcription factor SPEECHLESS 
 ghi-r.1   107942308   transcription factor SPEECHLESS 

close


Top 50 coexpressed genes to 101256653 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101256653 (sly-u.5 coexpression data)

CoexMap"102604858"


sotLOC102604858 | Entrez gene ID : 102604858      
Species sly nta ath gma bra ghi osa bdi vvi sot cit tae ppo zma mtr hvu sbi cre bna
Paralog 1 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot04016 [list] [network] MAPK signaling pathway - plant (217 genes)
GO BP
GO:0010052 [list] [network] guard cell differentiation  (14 genes)  IEA  
GO:0010374 [list] [network] stomatal complex development  (15 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (236 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (559 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1096 genes)  IEA  
Protein XP_006350638.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006350638.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006350638.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101256653
nta-r.1
for
107765572
nta-r.1
for
107784398
ath-u.5
for
SPCH
gma-u.5
for
SPCH1
gma-u.5
for
SPCH2
bra-r.6
for
103852045
bra-r.6
for
103844802
ghi-r.1
for
107947261
ghi-r.1
for
107942308


Ortholog ID: 5184
Species sly nta nta ath gma gma bra bra ghi ghi
Symbol LOC101256653 LOC107765572 LOC107784398 SPCH SPCH1 SPCH2 LOC103852045 LOC103844802 LOC107947261 LOC107942308
Function* transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101256653 107765572 107784398 835402 100777437 100808130 103852045 103844802 107947261 107942308
The preparation time of this page was 0.2 [sec].