ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102605956	probable beta-1,3-galactosyltransferase 2
sot-r.1	102590435	probable beta-1,3-galactosyltransferase 3
sot-r.1	102586590	probable beta-1,3-galactosyltransferase 2
sot-r.1	102578966	probable beta-1,3-galactosyltransferase 2
sly-u.5	101245676	probable beta-1,3-galactosyltransferase 2
sly-u.5	101254610	probable beta-1,3-galactosyltransferase 2
sly-u.5	101249433	probable beta-1,3-galactosyltransferase 2
nta-r.1	107759559	putative beta-1,3-galactosyltransferase 2
nta-r.1	107761699	putative beta-1,3-galactosyltransferase 2
nta-r.1	107776607	putative beta-1,3-galactosyltransferase 2
ath-u.5	AT2G32430	Galactosyltransferase family protein
ath-u.5	AT4G26940	Galactosyltransferase family protein
ath-u.5	AT1G05170	Galactosyltransferase family protein
gma-u.5	100793931	probable beta-1,3-galactosyltransferase 2
gma-u.5	100794838	probable beta-1,3-galactosyltransferase 2
gma-u.5	100810613	probable beta-1,3-galactosyltransferase 2
bra-r.6	103844168	probable beta-1,3-galactosyltransferase 2
bra-r.6	103867648	probable beta-1,3-galactosyltransferase 3
bra-r.6	103834828	probable beta-1,3-galactosyltransferase 4
vvi-u.5	100259024	probable beta-1,3-galactosyltransferase 2
vvi-u.5	100264061	probable beta-1,3-galactosyltransferase 2
vvi-u.5	100263657	probable beta-1,3-galactosyltransferase 2
ppo-u.5	7468503	probable beta-1,3-galactosyltransferase 2
ppo-u.5	7458303	probable beta-1,3-galactosyltransferase 2
mtr-u.5	11413221	probable beta-1,3-galactosyltransferase 2
ghi-r.1	107918123	probable beta-1,3-galactosyltransferase 4
ghi-r.1	107920711	probable beta-1,3-galactosyltransferase 2
ghi-r.1	107922574	probable beta-1,3-galactosyltransferase 4
bna-r.1	106440493	probable beta-1,3-galactosyltransferase 3
bna-r.1	106451318	probable beta-1,3-galactosyltransferase 3
bna-r.1	106371083	probable beta-1,3-galactosyltransferase 2
cit-r.1	102607994	probable beta-1,3-galactosyltransferase 2
cit-r.1	102626490	probable beta-1,3-galactosyltransferase 2
cit-r.1	102629052	probable beta-1,3-galactosyltransferase 2
osa-u.5	4328403	probable beta-1,3-galactosyltransferase 2
osa-u.5	4341851	probable beta-1,3-galactosyltransferase 2
osa-u.5	4333312	probable beta-1,3-galactosyltransferase 2
zma-u.5	100273113	putative beta-13-galactosyltransferase 4
zma-u.5	100282742	beta-1,3-galactosyltransferase sqv-2
zma-u.5	100216983	beta-1,3-galactosyltransferase sqv-2
tae-r.2	123132393	probable beta-1,3-galactosyltransferase 2
tae-r.2	123160174	probable beta-1,3-galactosyltransferase 2
tae-r.2	123147724	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123402114	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123410431	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123411884	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8076104	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8063024	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8083288	probable beta-1,3-galactosyltransferase 2
bdi-r.1	100823235	probable beta-1,3-galactosyltransferase 2
bdi-r.1	100822144	probable beta-1,3-galactosyltransferase 2
bdi-r.1	104585564	probable beta-1,3-galactosyltransferase 2

Top 50 coexpressed genes to 102605956 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102605956 (sot-r.1 coexpression data)

CoexMap"102605956"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000139 [list] [network] Golgi membrane

(71 genes)

IEA

GO MF

GO:0008378 [list] [network] galactosyltransferase activity

(33 genes)

IEA

Protein

XP_006365959.1 [sequence] [blastp]
XP_015160153.1 [sequence] [blastp]
XP_015160154.1 [sequence] [blastp]
XP_015160155.1 [sequence] [blastp]
XP_015160156.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, mito 3, chlo_mito 3, vacu 1, cyto_mito 1	(predict for XP_006365959.1)
chlo 3, mito 3, chlo_mito 3, vacu 1, cyto_mito 1	(predict for XP_015160153.1)
cysk 6, cyto 3, cysk_nucl 3, cysk_plas 3	(predict for XP_015160154.1)
cysk 6, cyto 3, cysk_nucl 3, cysk_plas 3	(predict for XP_015160155.1)
cysk 6, cyto 3, cysk_nucl 3, cysk_plas 3	(predict for XP_015160156.1)

Subcellular
localization
TargetP

scret 4, mito 3	(predict for XP_006365959.1)
scret 4	(predict for XP_015160153.1)
other 6, scret 3	(predict for XP_015160154.1)
other 6, scret 3	(predict for XP_015160155.1)
other 6, scret 3	(predict for XP_015160156.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102605956	sot-r.1 for 102590435	sot-r.1 for 102586590	sot-r.1 for 102578966	sly-u.5 for 101245676	sly-u.5 for 101254610	sly-u.5 for 101249433	nta-r.1 for 107759559	nta-r.1 for 107761699	nta-r.1 for 107776607	ath-u.5 for AT2G32430	ath-u.5 for AT4G26940	ath-u.5 for AT1G05170	gma-u.5 for 100793931	gma-u.5 for 100794838	gma-u.5 for 100810613	bra-r.6 for 103844168	bra-r.6 for 103867648	bra-r.6 for 103834828	vvi-u.5 for 100259024	vvi-u.5 for 100264061	vvi-u.5 for 100263657	ppo-u.5 for 7468503	ppo-u.5 for 7458303	mtr-u.5 for 11413221	ghi-r.1 for 107918123	ghi-r.1 for 107920711	ghi-r.1 for 107922574	bna-r.1 for 106440493	bna-r.1 for 106451318	bna-r.1 for 106371083	cit-r.1 for 102607994	cit-r.1 for 102626490	cit-r.1 for 102629052	osa-u.5 for 4328403	osa-u.5 for 4341851	osa-u.5 for 4333312	zma-u.5 for 100273113	zma-u.5 for 100282742	zma-u.5 for 100216983	tae-r.2 for 123132393	tae-r.2 for 123160174	tae-r.2 for 123147724	hvu-r.1 for 123402114	hvu-r.1 for 123410431	hvu-r.1 for 123411884	sbi-r.1 for 8076104	sbi-r.1 for 8063024	sbi-r.1 for 8083288	bdi-r.1 for 100823235	bdi-r.1 for 100822144	bdi-r.1 for 104585564

Ortholog

Ortholog ID: 1914

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*