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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G56840   myb-like transcription factor family protein 
 gma-u.5   MYB127   MYB transcription factor MYB127 
 gma-u.5   778093   transcription factor MYBS3 
 vvi-u.5   100242268   transcription factor MYBS3 
 vvi-u.5   100247499   transcription factor MYBS3 
 ppo-u.5   7497617   transcription factor MYBS3 
 mtr-u.5   11442166   transcription factor MYBS3 
 mtr-u.5   11438458   transcription factor MYBS3 
 sly-u.5   101267581   transcription factor MYBS3 
 sly-u.5   101265743   transcription factor MYBS3-like 
 osa-u.5   4339780   transcription factor MYBS3-like 
 osa-u.5   4327305   transcription factor MYBS3-like 
 osa-u.5   4324094   transcription factor MYBS3-like 
 zma-u.5   100381732   MYB-related transcription factor 
 zma-u.5   103634904   transcription factor MYB1R1 
 zma-u.5   110973014   uncharacterized LOC110973014 

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Top 50 coexpressed genes to AT5G56840 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G56840 (ath-u.5 coexpression data)

CoexMap"102606644"


citLOC102606644 | Entrez gene ID : 102606644    
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 2 1 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009739 [list] [network] response to gibberellin  (16 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (59 genes)  IEA  
GO:0009733 [list] [network] response to auxin  (85 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
Protein XP_006475945.2 [sequence] [blastp]
XP_006475946.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_006475945.2)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_006475946.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006475945.2)
chlo 7  (predict for XP_006475946.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT5G56840
gma-u.5
for
MYB127
gma-u.5
for
778093
vvi-u.5
for
100242268
vvi-u.5
for
100247499
ppo-u.5
for
7497617
mtr-u.5
for
11442166
mtr-u.5
for
11438458
sly-u.5
for
101267581
sly-u.5
for
101265743
osa-u.5
for
4339780
osa-u.5
for
4327305
osa-u.5
for
4324094
zma-u.5
for
100381732
zma-u.5
for
103634904
zma-u.5
for
110973014


Ortholog ID: 2944
Species cit ath bra bra ghi ghi bna bna gma gma vvi vvi ppo mtr mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC102624682 AT5G56840 LOC103856794 LOC103845112 LOC107907149 LOC107962763 LOC111204356 LOC106370323 MYB127 LOC778093 LOC100242268 LOC100247499 LOC7497617 LOC11438458 LOC11442166 LOC101265743 LOC102587181 LOC107817283 LOC107775558 LOC4339780 LOC4338039 LOC100194332 LOC100381732 LOC123077428 LOC123070065 LOC123439942 LOC123442898 LOC8082503 LOC110430297 LOC100840296 LOC100839820
Function* transcription factor MYBS3 myb-like transcription factor family protein transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3-like MYB transcription factor MYB127 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYB1R1-like transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3-like uncharacterized LOC100194332 MYB-related transcription factor transcription factor MYBS1 transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3-like transcription factor MYBS3 transcription factor MYBS3-like transcription factor MYBS3 transcription factor MYBS3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00710 Carbon fixation by Calvin cycle 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00910 Nitrogen metabolism 3
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 4
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 4
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04120 Ubiquitin mediated proteolysis 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae00940 Phenylpropanoid biosynthesis 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102624682 835786 103856794 103845112 107907149 107962763 111204356 106370323 778052 778093 100242268 100247499 7497617 11438458 11442166 101265743 102587181 107817283 107775558 4339780 4338039 100194332 100381732 123077428 123070065 123439942 123442898 8082503 110430297 100840296 100839820
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