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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  AT1G09220  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100805207  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 
 gma-u.5  100810110  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 
 vvi-u.5  100852442  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 
 vvi-u.5  100250298  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 
 mtr-u.5  11418936  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 
 sly-u.5  101248014  pentatricopeptide repeat-containing protein At1g09220, mitochondrial 

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Top 50 coexpressed genes to AT1G09220 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G09220 (ath-u.5 coexpression data)

CoexMap"102607250"


citLOC102607250 | Entrez gene ID : 102607250
Species ath gma vvi mtr sly bdi hvu bra cit bna ppo sbi ghi osa sot nta cre tae zma
Paralog 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052293111.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  pero 4,  mito 1  (predict for XP_052293111.1)
Subcellular
localization
TargetP
other 4  (predict for XP_052293111.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ath-u.5
for
AT1G09220


gma-u.5
for
100805207


gma-u.5
for
100810110


vvi-u.5
for
100852442


vvi-u.5
for
100250298


mtr-u.5
for
11418936


sly-u.5
for
101248014



Ortholog ID: 12243
Species cit ath bra ghi ghi gma gma vvi vvi mtr sly sot nta nta
Symbol LOC127898711 AT1G09220 LOC103836347 LOC107937045 LOC107893166 LOC100805207 LOC100810110 LOC100250298 LOC100852442 LOC11418936 LOC101248014 LOC102594595 LOC142179329 LOC107799105
Function* pentatricopeptide repeat-containing protein At1g09220, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like pentatricopeptide repeat-containing protein At1g09220, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 127898711 837442 103836347 107937045 107893166 100805207 100810110 100250298 100852442 11418936 101248014 102594595 142179329 107799105
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