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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102607750   binding partner of ACD11 1-like 
 cit-r.1   102628066   binding partner of ACD11 1 
 ath-u.5   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G14340   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103836077   binding partner of ACD11 1 
 bra-r.6   103858926   binding partner of ACD11 1 
 bra-r.6   103872127   binding partner of ACD11 1 
 ghi-r.1   121221115   binding partner of ACD11 1 
 ghi-r.1   107908465   binding partner of ACD11 1 
 ghi-r.1   107888621   binding partner of ACD11 1 
 bna-r.1   106388655   binding partner of ACD11 1 
 bna-r.1   106346475   binding partner of ACD11 1 
 bna-r.1   106362105   binding partner of ACD11 1 
 gma-u.5   100784005   binding partner of ACD11 1 
 gma-u.5   100805907   binding partner of ACD11 1 
 gma-u.5   100797381   RNA recognition motif-containing protein 
 vvi-u.5   100257613   binding partner of ACD11 1 
 vvi-u.5   SUC12   sucrose transporter 
 ppo-u.5   7482466   binding partner of ACD11 1 
 mtr-u.5   11422399   binding partner of ACD11 1 
 mtr-u.5   11417543   binding partner of ACD11 1 
 sly-u.5   101260815   binding partner of ACD11 1 
 sly-u.5   101266594   binding partner of ACD11 1 
 sot-r.1   102605891   binding partner of ACD11 1-like 
 sot-r.1   102591864   protein vip1-like 
 nta-r.1   107786740   binding partner of ACD11 1 
 nta-r.1   107774707   binding partner of ACD11 1 
 nta-r.1   107759357   binding partner of ACD11 1 
 osa-u.5   4337172   binding partner of ACD11 1 
 zma-u.5   100193735   uncharacterized LOC100193735 
 zma-u.5   100282237   uncharacterized LOC100282237 
 tae-r.2   123190828   binding partner of ACD11 1 
 tae-r.2   123054976   binding partner of ACD11 1 
 tae-r.2   123047170   binding partner of ACD11 1 
 hvu-r.1   123428197   binding partner of ACD11 1 
 sbi-r.1   8068465   binding partner of ACD11 1 
 bdi-r.1   100821991   binding partner of ACD11 1 

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Top 50 coexpressed genes to 102607750 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102607750 (cit-r.1 coexpression data)

CoexMap"102607750"


citLOC102607750 | Entrez gene ID : 102607750    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 3 3 3 3 2 1 2 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_024955731.1 [sequence] [blastp]
XP_052299526.1 [sequence] [blastp]
XP_052299527.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  vacu 2,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_024955731.1)
cyto 6,  vacu 2,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_052299526.1)
cyto 6,  vacu 2,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_052299527.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024955731.1)
other 8  (predict for XP_052299526.1)
other 8  (predict for XP_052299527.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102607750
cit-r.1
for
102628066
ath-u.5
for
AT3G01210
ath-u.5
for
AT1G14340
bra-r.6
for
103836077
bra-r.6
for
103858926
bra-r.6
for
103872127
ghi-r.1
for
121221115
ghi-r.1
for
107908465
ghi-r.1
for
107888621
bna-r.1
for
106388655
bna-r.1
for
106346475
bna-r.1
for
106362105
gma-u.5
for
100784005
gma-u.5
for
100805907
gma-u.5
for
100797381
vvi-u.5
for
100257613
vvi-u.5
for
SUC12
ppo-u.5
for
7482466
mtr-u.5
for
11422399
mtr-u.5
for
11417543
sly-u.5
for
101260815
sly-u.5
for
101266594
sot-r.1
for
102605891
sot-r.1
for
102591864
nta-r.1
for
107786740
nta-r.1
for
107774707
nta-r.1
for
107759357
osa-u.5
for
4337172
zma-u.5
for
100193735
zma-u.5
for
100282237
tae-r.2
for
123190828
tae-r.2
for
123054976
tae-r.2
for
123047170
hvu-r.1
for
123428197
sbi-r.1
for
8068465
bdi-r.1
for
100821991


Ortholog ID: 4727
Species cit cit ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC102607750 LOC102628066 AT3G01210 AT1G14340 LOC103836077 LOC103858926 LOC103872127 LOC121221115 LOC107908465 LOC107888621 LOC106388655 LOC106346475 LOC106400990 LOC100784005 LOC100805907 LOC100797381 LOC100257613 SUC12 LOC7482466 LOC11422399 LOC11417543 LOC101260815 LOC101266594 LOC102605891 LOC102591864 LOC107786740 LOC107774707 LOC107775927 LOC4337172 LOC100193735 LOC100282237 LOC123190828 LOC123054976 LOC123047170 LOC123428197 LOC8068465 LOC100821991
Function* binding partner of ACD11 1-like binding partner of ACD11 1 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1-like binding partner of ACD11 1 binding partner of ACD11 1 RNA recognition motif-containing protein binding partner of ACD11 1 sucrose transporter binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1-like protein vip1-like binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 uncharacterized LOC100193735 uncharacterized LOC100282237 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath04075 Plant hormone signal transduction 2
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
bra00900 Terpenoid backbone biosynthesis 3
bra00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna00900 Terpenoid backbone biosynthesis 2
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma04120 Ubiquitin mediated proteolysis 2
gma00270 Cysteine and methionine metabolism 2
gma03040 Spliceosome 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 3
bdi01040 Biosynthesis of unsaturated fatty acids 3
bdi01212 Fatty acid metabolism 3
bdi00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102607750 102628066 821275 837995 103836077 103858926 103872127 121221115 107908465 107888621 106388655 106346475 106400990 100784005 100805907 100797381 100257613 100251604 7482466 11422399 11417543 101260815 101266594 102605891 102591864 107786740 107774707 107775927 4337172 100193735 100282237 123190828 123054976 123047170 123428197 8068465 100821991
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