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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G14040   Pectin lyase-like superfamily protein 
 ath-u.5   AT5G48140   Pectin lyase-like superfamily protein 
 bna-r.1   111201742   exopolygalacturonase-like 
 bna-r.1   106385399   exopolygalacturonase clone GBGE184 
 gma-u.5   100810484   exopolygalacturonase 
 vvi-u.5   100265436   exopolygalacturonase 
 sly-u.5   101249539   polygalacturonase-like 
 osa-u.5   4341515   exopolygalacturonase 
 osa-u.5   4323970   exopolygalacturonase 
 osa-u.5   4328617   exopolygalacturonase 
 zma-u.5   103626843   exopolygalacturonase-like 
 zma-u.5   100273946   uncharacterized LOC100273946 
 tae-r.2   123132586   exopolygalacturonase 
 tae-r.2   123166829   exopolygalacturonase 
 tae-r.2   123160021   exopolygalacturonase 

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Top 50 coexpressed genes to AT3G14040 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G14040 (ath-u.5 coexpression data)

CoexMap"102608401"


citLOC102608401 | Entrez gene ID : 102608401    
Species ath bna gma vvi sly osa zma tae hvu sot bdi nta ppo cre mtr sbi bra ghi cit
Paralog 2 2 1 1 1 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00040 [list] [network] Pentose and glucuronate interconversions (105 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (640 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (60 genes)  IEA  
Protein XP_052289914.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  extr 2,  cysk_nucl 2  (predict for XP_052289914.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_052289914.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT3G14040
ath-u.5
for
AT5G48140
bna-r.1
for
111201742
bna-r.1
for
106385399
gma-u.5
for
100810484
vvi-u.5
for
100265436
sly-u.5
for
101249539
osa-u.5
for
4341515
osa-u.5
for
4323970
osa-u.5
for
4328617
zma-u.5
for
103626843
zma-u.5
for
100273946
tae-r.2
for
123132586
tae-r.2
for
123166829
tae-r.2
for
123160021


Ortholog ID: 84
Species ath ghi bna bna gma sly sly nta nta nta osa osa zma zma zma tae tae tae
Symbol AT3G07820 LOC121221131 LOC106388994 LOC106427912 LOC100779556 LOC101249539 LOC101263150 LOC107822352 LOC107769351 LOC107768349 LOC4341515 LOC4323970 LOC100273946 LOC118472226 LOC118472225 LOC123168013 LOC123152443 LOC123144207
Function* Pectin lyase-like superfamily protein polygalacturonase-like polygalacturonase-like polygalacturonase-like polygalacturonase polygalacturonase-like exopolygalacturonase-like exopolygalacturonase clone GBGE184-like polygalacturonase-like polygalacturonase-like exopolygalacturonase exopolygalacturonase uncharacterized LOC100273946 exopolygalacturonase exopolygalacturonase exopolygalacturonase exopolygalacturonase exopolygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
nta00740 Riboflavin metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819973 121221131 106388994 106427912 100779556 101249539 101263150 107822352 107769351 107768349 4341515 4323970 100273946 118472226 118472225 123168013 123152443 123144207
The preparation time of this page was 1.9 [sec].