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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102608653   uncharacterized LOC102608653 
 gma-u.5   100805068   uncharacterized LOC100805068 
 vvi-u.5   100255740   uncharacterized LOC100255740 
 ppo-u.5   18094139   uncharacterized LOC18094139 
 mtr-u.5   25502451   uncharacterized LOC25502451 
 sly-u.5   101262742   uncharacterized LOC101262742 
 osa-u.5   4340017   uncharacterized LOC4340017 
 zma-u.5   100283074   rad1-like protein 

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Top 50 coexpressed genes to 102608653 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102608653 (cit-r.1 coexpression data)

CoexMap"102608653"


citLOC102608653 | Entrez gene ID : 102608653    
Species cit gma vvi ppo mtr sly osa zma sbi nta bra cre hvu bdi sot tae ath bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000077 [list] [network] DNA damage checkpoint signaling  (20 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO:0030896 [list] [network] checkpoint clamp complex  (7 genes)  IEA  
GO MF
Protein XP_006485413.1 [sequence] [blastp]
XP_024957249.1 [sequence] [blastp]
XP_024957250.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  cysk 1,  cysk_plas 1  (predict for XP_006485413.1)
cysk 4,  nucl 3,  chlo 1,  cyto 1,  nucl_plas 1  (predict for XP_024957249.1)
cysk 4,  nucl 3,  chlo 1,  cyto 1,  nucl_plas 1  (predict for XP_024957250.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006485413.1)
other 6  (predict for XP_024957249.1)
other 6  (predict for XP_024957250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102608653

.
gma-u.5
for
100805068

.
vvi-u.5
for
100255740

.
ppo-u.5
for
18094139

.
mtr-u.5
for
25502451

.
sly-u.5
for
101262742

.
osa-u.5
for
4340017

.
zma-u.5
for
100283074

.


Ortholog ID: 10193
Species gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi cre sot cit bdi nta nta
Symbol LOC100805068 LOC101262742 LOC4340017 LOC100283074 LOC103860940 LOC100255740 LOC18094139 LOC25502451 LOC123169323 LOC123088187 LOC123412382 LOC107919940 LOC107933569 CHLRE_03g162250v5 LOC102578796 LOC102608653 LOC100829058 LOC107830644 LOC107805580
Function* uncharacterized LOC100805068 uncharacterized LOC101262742 uncharacterized LOC4340017 rad1-like protein uncharacterized LOC103860940 uncharacterized LOC100255740 uncharacterized LOC18094139 uncharacterized LOC25502451 uncharacterized LOC123169323 uncharacterized LOC123088187 uncharacterized LOC123412382 uncharacterized LOC107919940 uncharacterized LOC107933569 uncharacterized protein uncharacterized LOC102578796 uncharacterized LOC102608653 uncharacterized LOC100829058 uncharacterized LOC107830644 uncharacterized LOC107805580
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 7
vvi03030 DNA replication 6
vvi03420 Nucleotide excision repair 6
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 6
cre03410 Base excision repair 4
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100805068 101262742 4340017 100283074 103860940 100255740 18094139 25502451 123169323 123088187 123412382 107919940 107933569 5729088 102578796 102608653 100829058 107830644 107805580
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