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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102608678   pentatricopeptide repeat-containing protein At4g20090 
 ath-u.5   EMB1025   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103857964   pentatricopeptide repeat-containing protein At4g20090 
 ghi-r.1   107957685   pentatricopeptide repeat-containing protein At4g20090 
 ghi-r.1   107914093   pentatricopeptide repeat-containing protein At4g20090 
 bna-r.1   106438057   pentatricopeptide repeat-containing protein At4g20090-like 
 bna-r.1   106365937   pentatricopeptide repeat-containing protein At4g20090 
 gma-u.5   100801994   pentatricopeptide repeat-containing protein At4g20090 
 vvi-u.5   100249022   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7491468   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7465363   pentatricopeptide repeat-containing protein At4g20090 
 mtr-u.5   11444332   pentatricopeptide repeat-containing protein At4g20090 
 sly-u.5   101253553   pentatricopeptide repeat-containing protein At4g20090 
 sot-r.1   102595408   pentatricopeptide repeat-containing protein At4g20090 
 nta-r.1   107775862   uncharacterized LOC107775862 
 nta-r.1   107800787   uncharacterized LOC107800787 
 osa-u.5   9268066   pentatricopeptide repeat-containing protein At4g20090 
 zma-u.5   118476028   uncharacterized LOC118476028 
 tae-r.2   123168566   pentatricopeptide repeat-containing protein At4g20090 
 hvu-r.1   123411413   pentatricopeptide repeat-containing protein At4g20090 
 sbi-r.1   8060853   pentatricopeptide repeat-containing protein At4g20090 
 bdi-r.1   100840200   pentatricopeptide repeat-containing protein At4g20090 

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Top 50 coexpressed genes to 102608678 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102608678 (cit-r.1 coexpression data)

CoexMap"102608678"


citLOC102608678 | Entrez gene ID : 102608678      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 2 1 1 1 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006468575.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_006468575.2)
Subcellular
localization
TargetP
chlo 6,  mito 6  (predict for XP_006468575.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102608678
ath-u.5
for
EMB1025
bra-r.6
for
103857964
ghi-r.1
for
107957685
ghi-r.1
for
107914093
bna-r.1
for
106438057
bna-r.1
for
106365937
gma-u.5
for
100801994
vvi-u.5
for
100249022
ppo-u.5
for
7491468
ppo-u.5
for
7465363
mtr-u.5
for
11444332
sly-u.5
for
101253553
sot-r.1
for
102595408
nta-r.1
for
107775862
nta-r.1
for
107800787
osa-u.5
for
9268066
zma-u.5
for
118476028
tae-r.2
for
123168566
hvu-r.1
for
123411413
sbi-r.1
for
8060853
bdi-r.1
for
100840200


Ortholog ID: 11710
Species cit ath bra ghi ghi bna bna gma vvi ppo ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol LOC102608678 EMB1025 LOC103857964 LOC107957685 LOC107914093 LOC106438057 LOC106365937 LOC100801994 LOC100249022 LOC7491468 LOC7465363 LOC11444332 LOC101253553 LOC102595408 LOC107775862 LOC107800787 LOC9268066 LOC118476028 LOC123168566 LOC123411413 LOC8060853 LOC100840200
Function* pentatricopeptide repeat-containing protein At4g20090 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090-like pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 uncharacterized LOC107775862 uncharacterized LOC107800787 pentatricopeptide repeat-containing protein At4g20090 uncharacterized LOC118476028 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00052 Galactose metabolism 2
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102608678 827754 103857964 107957685 107914093 106438057 106365937 100801994 100249022 7491468 7465363 11444332 101253553 102595408 107775862 107800787 9268066 118476028 123168566 123411413 8060853 100840200
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