ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102609192	uncharacterized LOC102609192
ath-u.5	AT3G29270	RING/U-box superfamily protein
ath-u.5	AT1G69330	RING/U-box superfamily protein
gma-u.5	100796991	uncharacterized LOC100796991
gma-u.5	100499984	uncharacterized LOC100499984
gma-u.5	100809368	uncharacterized LOC100809368
vvi-u.5	100241642	uncharacterized LOC100241642
vvi-u.5	100854732	uncharacterized LOC100854732
ppo-u.5	7484736	uncharacterized LOC7484736
ppo-u.5	7463053	uncharacterized LOC7463053
ppo-u.5	7484557	uncharacterized LOC7484557
mtr-u.5	11420138	uncharacterized LOC11420138
mtr-u.5	11407689	uncharacterized LOC11407689
sly-u.5	101266380	uncharacterized LOC101266380
osa-u.5	4332028	uncharacterized LOC4332028
osa-u.5	4333163	uncharacterized LOC4333163
zma-u.5	100285712	RING zinc finger protein-like
zma-u.5	100283429	RING zinc finger protein-like
zma-u.5	100281187	RING zinc finger protein-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024955047.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, mito 1, E.R. 1, chlo 1, nucl 1, extr 1, cyto_mito 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_024955047.2)

Subcellular
localization
TargetP

other 2

(predict for XP_024955047.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102609192	ath-u.5 for AT3G29270	ath-u.5 for AT1G69330	gma-u.5 for 100796991	gma-u.5 for 100499984	gma-u.5 for 100809368	vvi-u.5 for 100241642	vvi-u.5 for 100854732	ppo-u.5 for 7484736	ppo-u.5 for 7463053	ppo-u.5 for 7484557	mtr-u.5 for 11420138	mtr-u.5 for 11407689	sly-u.5 for 101266380	osa-u.5 for 4332028	osa-u.5 for 4333163	zma-u.5 for 100285712	zma-u.5 for 100283429	zma-u.5 for 100281187

Ortholog

Ortholog ID: 2911

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102609192

RING/U-box superfamily protein

uncharacterized LOC103875090

uncharacterized LOC103831330

uncharacterized LOC107887364

uncharacterized LOC121229614

RING finger protein 222

uncharacterized BNAC07G25710D

uncharacterized LOC100499984

uncharacterized LOC100811549

uncharacterized LOC100854732

uncharacterized LOC100241642

uncharacterized LOC7492895

uncharacterized LOC7484736

uncharacterized LOC11407689

uncharacterized LOC11420138

uncharacterized LOC101266380

uncharacterized LOC102594483

uncharacterized LOC107777864

uncharacterized LOC107770092

uncharacterized LOC4333163

uncharacterized LOC4332028

RING zinc finger protein-like

uncharacterized LOC123093014

uncharacterized LOC123098293

uncharacterized LOC123449349

uncharacterized LOC8081845

RING finger protein 222

uncharacterized LOC100833943

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01230	Biosynthesis of amino acids	3
cit01200	Carbon metabolism	3
cit00030	Pentose phosphate pathway	2
cit00710	Carbon fixation by Calvin cycle	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04382	Cornified envelope formation	3
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma00900	Terpenoid backbone biosynthesis	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4
nta04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4
nta04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

102609192

843265

822584

103875090

103831330

107887364

121229614

106405651

106407190

100499984

100811549

100854732

100241642

7492895

7484736

11407689

11420138

101266380

102594483

107777864

107770092

4333163

4332028

100285712

100283429

123093014

123098293

123449349

8081845

8066033

100833943

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102609192 (cit-r.1 coexpression data)

Top 50 enrichment test to 102609192 (cit-r.1 coexpression data)


Species	cit	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	3	2	3	2	1	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102609192 (cit-r.1 coexpression data)

Top 50 enrichment test to 102609192 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**