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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609616   uncharacterized LOC102609616 
 ath-u.5   AT3G57790   Pectin lyase-like superfamily protein 
 bra-r.6   103848548   probable polygalacturonase 
 ghi-r.1   107891280   exo-poly-alpha-D-galacturonosidase 
 ghi-r.1   107889531   exo-poly-alpha-D-galacturonosidase 
 gma-u.5   100794954   exo-poly-alpha-D-galacturonosidase 
 vvi-u.5   100257213   uncharacterized LOC100257213 
 ppo-u.5   7468957   uncharacterized LOC7468957 
 mtr-u.5   11418485   exo-poly-alpha-D-galacturonosidase 
 sly-u.5   101260208   uncharacterized LOC101260208 
 sot-r.1   102599672   exo-poly-alpha-D-galacturonosidase 
 nta-r.1   107791996   putative polygalacturonase At3g15720 
 nta-r.1   107759633   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 nta-r.1   142181584   uncharacterized LOC142181584 
 osa-u.5   4347428   probable polygalacturonase 
 zma-u.5   100282589   polygalacturonase 
 tae-r.2   123075099   exopolygalacturonase 
 tae-r.2   123104158   probable polygalacturonase 
 tae-r.2   123112396   exopolygalacturonase 
 hvu-r.1   123399373   exopolygalacturonase-like 
 hvu-r.1   123440600   probable polygalacturonase 
 sbi-r.1   8064845   probable polygalacturonase 
 bdi-r.1   100830144   probable polygalacturonase 
 cre-r.1   CHLRE_12g556350v5   uncharacterized protein 

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Top 50 coexpressed genes to 102609616 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609616 (cit-r.1 coexpression data)

CoexMap"102609616"


citLOC102609616 | Entrez gene ID : 102609616    
Species cit ath bra ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 1 1 1 2 1 1 1 1 1 1 3 1 1 3 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (640 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (60 genes)  IEA  
Protein XP_006490045.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  extr 2,  E.R. 2,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for XP_006490045.2)
Subcellular
localization
TargetP
scret 7  (predict for XP_006490045.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609616
ath-u.5
for
AT3G57790
bra-r.6
for
103848548
ghi-r.1
for
107891280
ghi-r.1
for
107889531
gma-u.5
for
100794954
vvi-u.5
for
100257213
ppo-u.5
for
7468957
mtr-u.5
for
11418485
sly-u.5
for
101260208
sot-r.1
for
102599672
nta-r.1
for
107791996
nta-r.1
for
107759633
nta-r.1
for
142181584
osa-u.5
for
4347428
zma-u.5
for
100282589
tae-r.2
for
123075099
tae-r.2
for
123104158
tae-r.2
for
123112396
hvu-r.1
for
123399373
hvu-r.1
for
123440600
sbi-r.1
for
8064845
bdi-r.1
for
100830144
cre-r.1
for
CHLRE_12g556350v5


Ortholog ID: 9544
Species cit ath bra ghi ghi gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC102609616 AT3G57790 LOC103848548 LOC107891280 LOC107889531 LOC100794954 LOC100257213 LOC7468957 LOC11418485 LOC101260208 LOC102599672 LOC107791996 LOC107759633 LOC142181584 LOC4347428 LOC100282589 LOC123075099 LOC123104158 LOC123112396 LOC123399373 LOC123440600 LOC8064845 LOC100830144 CHLRE_12g556350v5
Function* uncharacterized LOC102609616 Pectin lyase-like superfamily protein probable polygalacturonase exo-poly-alpha-D-galacturonosidase exo-poly-alpha-D-galacturonosidase exo-poly-alpha-D-galacturonosidase uncharacterized LOC100257213 uncharacterized LOC7468957 exo-poly-alpha-D-galacturonosidase uncharacterized LOC101260208 exo-poly-alpha-D-galacturonosidase putative polygalacturonase At3g15720 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial uncharacterized LOC142181584 probable polygalacturonase polygalacturonase exopolygalacturonase probable polygalacturonase exopolygalacturonase exopolygalacturonase-like probable polygalacturonase probable polygalacturonase probable polygalacturonase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 6
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 3
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 3
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 4
gma04120 Ubiquitin mediated proteolysis 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00220 Arginine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00052 Galactose metabolism 3
osa00511 Other glycan degradation 2
osa00040 Pentose and glucuronate interconversions 2
osa00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 15
zma04145 Phagosome 15
zma04142 Lysosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
tae01200 Carbon metabolism 3
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 4
tae00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 4
sbi00330 Arginine and proline metabolism 3
sbi04146 Peroxisome 2
sbi00620 Pyruvate metabolism 2
sbi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi00280 Valine, leucine and isoleucine degradation 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609616 824949 103848548 107891280 107889531 100794954 100257213 7468957 11418485 101260208 102599672 107791996 107759633 142181584 4347428 100282589 123075099 123104158 123112396 123399373 123440600 8064845 100830144 5719753
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