Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102610035   peptide deformylase 1B, chloroplastic/mitochondrial 
 ath-u.5   PDF1B   peptide deformylase 1B 
 gma-u.5   100527799   pep_deformylase superfamily protein 
 gma-u.5   100500424   pep-deformylase superfamily protein 
 vvi-u.5   100250707   peptide deformylase 1B, chloroplastic 
 ppo-u.5   7496836   peptide deformylase 1B, chloroplastic/mitochondrial 
 mtr-u.5   25498044   peptide deformylase 1B, chloroplastic 
 sly-u.5   PDF1B   peptide deformylase-like protein 
 osa-u.5   9269695   peptide deformylase 1B, chloroplastic-like 
 osa-u.5   4326576   peptide deformylase 1B, chloroplastic-like 
 zma-u.5   103636114   peptide deformylase 1B, chloroplastic 

close


Top 50 coexpressed genes to 102610035 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102610035 (cit-r.1 coexpression data)

CoexMap"102610035"


citLOC102610035 | Entrez gene ID : 102610035    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018206 [list] [network] peptidyl-methionine modification  (8 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (512 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (523 genes)  IEA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IEA  
Protein XP_006470303.2 [sequence] [blastp]
XP_006470304.2 [sequence] [blastp]
XP_006470305.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006470303.2)
chlo 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006470304.2)
chlo 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006470305.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_006470303.2)
chlo 3  (predict for XP_006470304.2)
chlo 3  (predict for XP_006470305.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102610035
ath-u.5
for
PDF1B
gma-u.5
for
100527799
gma-u.5
for
100500424
vvi-u.5
for
100250707
ppo-u.5
for
7496836
mtr-u.5
for
25498044
sly-u.5
for
PDF1B
osa-u.5
for
9269695
osa-u.5
for
4326576
zma-u.5
for
103636114


Ortholog ID: 9095
Species cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi bdi cre cre
Symbol LOC102610035 PDF1B LOC103846472 LOC107897571 LOC107914239 LOC106372106 LOC106418618 LOC100527799 LOC100500424 LOC100250707 LOC7496836 LOC25498044 PDF1B LOC102596139 LOC107766294 LOC107806610 LOC4326576 LOC9269695 LOC103636114 LOC123061560 LOC123078636 LOC123443943 LOC8058210 LOC100821406 CHLRE_01g039650v5 CHLRE_01g039750v5
Function* peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic/mitochondrial pep_deformylase superfamily protein pep-deformylase superfamily protein peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic/mitochondrial peptide deformylase 1B, chloroplastic peptide deformylase-like protein peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic-like peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic peptide deformylase 1B, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00860 Porphyrin metabolism 4
bra01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi00480 Glutathione metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 3
ghi00561 Glycerolipid metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102610035 831318 103846472 107897571 107914239 106372106 106418618 100527799 100500424 100250707 7496836 25498044 543648 102596139 107766294 107806610 4326576 9269695 103636114 123061560 123078636 123443943 8058210 100821406 5715539 5715542
The preparation time of this page was 0.1 [sec].