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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102611453   uncharacterized LOC102611453 
 ath-u.5   RAD9   cell cycle checkpoint control protein family 
 bra-r.6   103870819   cell cycle checkpoint control protein RAD9A 
 ghi-r.1   107942221   cell cycle checkpoint control protein RAD9A 
 ghi-r.1   107927183   cell cycle checkpoint control protein RAD9A 
 bna-r.1   106453051   cell cycle checkpoint control protein RAD9A 
 bna-r.1   125609133   cell cycle checkpoint control protein RAD9A-like 
 gma-u.5   100819112   cell cycle checkpoint control protein RAD9A 
 vvi-u.5   100264904   uncharacterized LOC100264904 
 ppo-u.5   7481737   uncharacterized LOC7481737 
 mtr-u.5   11421369   cell cycle checkpoint control protein RAD9A 
 sly-u.5   101259988   uncharacterized LOC101259988 
 sot-r.1   102593069   cell cycle checkpoint control protein RAD9A 
 nta-r.1   107806587   uncharacterized LOC107806587 
 nta-r.1   107822333   uncharacterized LOC107822333 
 nta-r.1   107798041   uncharacterized LOC107798041 
 osa-u.5   4332812   uncharacterized LOC4332812 
 zma-u.5   100283409   auxin response factor 75 
 tae-r.2   123085847   cell cycle checkpoint control protein RAD9B 
 hvu-r.1   123448627   cell cycle checkpoint control protein RAD9B 
 sbi-r.1   8082301   cell cycle checkpoint control protein RAD9A 
 bdi-r.1   100841158   cell cycle checkpoint control protein RAD9A 
 cre-r.1   CHLRE_16g682950v5   uncharacterized protein 

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Top 50 coexpressed genes to 102611453 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102611453 (cit-r.1 coexpression data)

CoexMap"102611453"


citLOC102611453 | Entrez gene ID : 102611453    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 3 1 1 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071479 [list] [network] cellular response to ionizing radiation  (3 genes)  IEA  
GO:0031573 [list] [network] mitotic intra-S DNA damage checkpoint signaling  (8 genes)  IEA  
GO:0000076 [list] [network] DNA replication checkpoint signaling  (17 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO:0030896 [list] [network] checkpoint clamp complex  (7 genes)  IEA  
GO MF
Protein XP_006472084.2 [sequence] [blastp]
XP_006472086.2 [sequence] [blastp]
XP_052298608.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for XP_006472084.2)
chlo 6,  nucl 2,  cyto 1,  mito 1,  cysk 1  (predict for XP_006472086.2)
chlo 4,  nucl 3,  chlo_mito 3  (predict for XP_052298608.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_006472084.2)
mito 3  (predict for XP_006472086.2)
mito 3  (predict for XP_052298608.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102611453
ath-u.5
for
RAD9
bra-r.6
for
103870819
ghi-r.1
for
107942221
ghi-r.1
for
107927183
bna-r.1
for
106453051
bna-r.1
for
125609133
gma-u.5
for
100819112
vvi-u.5
for
100264904
ppo-u.5
for
7481737
mtr-u.5
for
11421369
sly-u.5
for
101259988
sot-r.1
for
102593069
nta-r.1
for
107806587
nta-r.1
for
107822333
nta-r.1
for
107798041
osa-u.5
for
4332812
zma-u.5
for
100283409
tae-r.2
for
123085847
hvu-r.1
for
123448627
sbi-r.1
for
8082301
bdi-r.1
for
100841158
cre-r.1
for
CHLRE_16g682950v5


Ortholog ID: 9450
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta nta osa zma tae hvu sbi bdi cre
Symbol LOC102611453 RAD9 LOC103870819 LOC107942221 LOC107927183 LOC106453051 LOC125609133 LOC100819112 LOC100264904 LOC7481737 LOC11421369 LOC101259988 LOC102593069 LOC107806587 LOC107822333 LOC107798041 LOC4332812 LOC100283409 LOC123085847 LOC123448627 LOC8082301 LOC100841158 CHLRE_16g682950v5
Function* uncharacterized LOC102611453 cell cycle checkpoint control protein family cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A-like cell cycle checkpoint control protein RAD9A uncharacterized LOC100264904 uncharacterized LOC7481737 cell cycle checkpoint control protein RAD9A uncharacterized LOC101259988 cell cycle checkpoint control protein RAD9A uncharacterized LOC107806587 uncharacterized LOC107822333 uncharacterized LOC107798041 uncharacterized LOC4332812 auxin response factor 75 cell cycle checkpoint control protein RAD9B cell cycle checkpoint control protein RAD9B cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra04814 Motor proteins 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 6
bna03018 RNA degradation 4
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03018 RNA degradation 4
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 4
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03430 Mismatch repair 3
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00790 Folate biosynthesis 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102611453 819713 103870819 107942221 107927183 106453051 125609133 100819112 100264904 7481737 11421369 101259988 102593069 107806587 107822333 107798041 4332812 100283409 123085847 123448627 8082301 100841158 5717589
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