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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102612041   uncharacterized LOC102612041 
 ath-u.5   AT1G16445   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103842850   putative rRNA methylase YtqB 
 ghi-r.1   107894357   putative rRNA methylase YtqB 
 ghi-r.1   107918561   putative rRNA methylase YtqB 
 bna-r.1   106416226   putative rRNA methylase YtqB 
 bna-r.1   106413814   putative rRNA methylase YtqB 
 gma-u.5   100798928   uncharacterized LOC100798928 
 vvi-u.5   100252956   tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic 
 ppo-u.5   7462554   uncharacterized LOC7462554 
 mtr-u.5   25483867   putative rRNA methylase YtqB 
 sly-u.5   101265175   tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic 
 sot-r.1   102588261   putative rRNA methylase YtqB 
 nta-r.1   107827610   tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic-like 
 nta-r.1   107762560   tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic 
 osa-u.5   4339291   putative rRNA methylase YtqB 
 zma-u.5   103630384   uncharacterized LOC103630384 
 tae-r.2   123182559   putative rRNA methylase YtqB 
 tae-r.2   123168338   uncharacterized LOC123168338 
 hvu-r.1   123447697   putative rRNA methylase YtqB 
 sbi-r.1   8080098   putative rRNA methylase YtqB 
 sbi-r.1   8080099   uncharacterized LOC8080099 
 bdi-r.1   100841937   putative rRNA methylase YtqB 
 cre-r.1   CHLRE_12g517550v5   uncharacterized protein 

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Top 50 coexpressed genes to 102612041 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102612041 (cit-r.1 coexpression data)

CoexMap"102612041"


citLOC102612041 | Entrez gene ID : 102612041    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 2 1 1 2 1 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006493791.1 [sequence] [blastp]
XP_024949443.1 [sequence] [blastp]
XP_024949444.1 [sequence] [blastp]
XP_024949445.1 [sequence] [blastp]
XP_052289198.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006493791.1)
chlo 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_024949443.1)
chlo 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_024949444.1)
chlo 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_024949445.1)
chlo 6,  mito 1,  vacu 1,  cyto 1,  extr 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_052289198.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_006493791.1)
scret 5  (predict for XP_024949443.1)
scret 5  (predict for XP_024949444.1)
scret 5  (predict for XP_024949445.1)
scret 8,  mito 6  (predict for XP_052289198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102612041
ath-u.5
for
AT1G16445
bra-r.6
for
103842850
ghi-r.1
for
107894357
ghi-r.1
for
107918561
bna-r.1
for
106416226
bna-r.1
for
106413814
gma-u.5
for
100798928
vvi-u.5
for
100252956
ppo-u.5
for
7462554
mtr-u.5
for
25483867
sly-u.5
for
101265175
sot-r.1
for
102588261
nta-r.1
for
107827610
nta-r.1
for
107762560
osa-u.5
for
4339291
zma-u.5
for
103630384
tae-r.2
for
123182559
tae-r.2
for
123168338
hvu-r.1
for
123447697
sbi-r.1
for
8080098
sbi-r.1
for
8080099
bdi-r.1
for
100841937
cre-r.1
for
CHLRE_12g517550v5


Ortholog ID: 9212
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC102612041 AT1G16445 LOC103842850 LOC107894357 LOC107918561 LOC106416226 LOC106413814 LOC100798928 LOC100252956 LOC7462554 LOC25483867 LOC101265175 LOC102588261 LOC107827610 LOC107762560 LOC4339291 LOC103630384 LOC123168338 LOC123061953 LOC123447697 LOC8080098 LOC8080099 LOC100841937 CHLRE_12g517550v5
Function* uncharacterized LOC102612041 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein putative rRNA methylase YtqB putative rRNA methylase YtqB putative rRNA methylase YtqB putative rRNA methylase YtqB putative rRNA methylase YtqB uncharacterized LOC100798928 tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic uncharacterized LOC7462554 putative rRNA methylase YtqB tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic putative rRNA methylase YtqB tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic-like tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic putative rRNA methylase YtqB uncharacterized LOC103630384 uncharacterized LOC123168338 putative rRNA methylase YtqB putative rRNA methylase YtqB putative rRNA methylase YtqB uncharacterized LOC8080099 putative rRNA methylase YtqB uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 6
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00620 Pyruvate metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00620 Pyruvate metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00860 Porphyrin metabolism 4
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03440 Homologous recombination 3
tae00900 Terpenoid backbone biosynthesis 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102612041 838215 103842850 107894357 107918561 106416226 106413814 100798928 100252956 7462554 25483867 101265175 102588261 107827610 107762560 4339291 103630384 123168338 123061953 123447697 8080098 8080099 100841937 5722638
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